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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
66 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180127995
OATA01018995
257317
Actinomycetota
CCT
Arg
>WENV180127465
OATA01001391
258011
Actinomycetota
CCG
Arg
>WENV180127776
OATA01004950
50172
Actinomycetota
TGA
Ser
>WENV180127754
OATA01004438
124775
Actinomycetota
TAA
Leu
>WENV180127638
OATA01002606
19409
Actinomycetota
GAG
Leu
>WENV180127919
OATA01009715
190892
Actinomycetota
CAT
Met
>WENV180127478
OATA01001514
105930
Actinomycetota
TAA
Leu
>WENV180127504
OATA01001661
105929
Actinomycetota
GTA
Tyr
>WENV180127798
OATA01005420
293317
Actinomycetota
GGC
Ala
>WENV180127799
OATA01005420
293317
Actinomycetota
GGC
Ala
>WENV180127497
OATA01001592
162410
Actinomycetota
TCT
Arg
>WENV180127684
OATA01003330
261299
Actinomycetota
GCC
Gly
>WENV180127781
OATA01005050
211952
Actinomycetota
ACG
Arg
>WENV180127782
OATA01005050
211952
Actinomycetota
ACG
Arg
>WENV180127590
OATA01002245
261298
Actinomycetota
CGT
Thr
>WENV180127510
OATA01001679
257345
Actinomycetota
CCT
Arg
>WENV180127683
OATA01003330
26695
Actinomycetota
GAG
Leu
>WENV180127835
OATA01006504
139249
Actinomycetota
GTC
Asp
>WENV180127773
OATA01004924
58412
Actinomycetota
CGA
Ser
>WENV180127003
OATA01000245
261336
Actinomycetota
GTT
Asn
>WENV180127494
OATA01001580
162417
Actinomycetota
CGG
Pro
>WENV180127770
OATA01004878
371217
Actinomycetota
CAC
Val
>WENV180127148
OATA01000438
469498
Actinomycetota
CCC
Gly
>WENV180127417
OATA01001222
469498
Actinomycetota
CCC
Gly
>WENV180127611
OATA01002448
18633
Actinomycetota
CGA
Ser
>WENV180127769
OATA01004878
261306
Actinomycetota
>WENV180127316
OATA01000858
133430
Actinomycetota
TAA
Leu
>WENV180127819
OATA01006082
162411
Actinomycetota
CCG
Arg
>WENV180127124
OATA01000401
238709
Actinomycetota
CAA
Leu
>WENV180127471
OATA01001462
238709
Actinomycetota
CAA
Leu
>WENV180127874
OATA01007666
238709
Actinomycetota
CAA
Leu
>WENV180127737
OATA01004225
159159
Actinomycetota
TGG
Pro
>WENV180128130
OATA01049896
371214
Actinomycetota
GTT
Asn
>WENV180127605
OATA01002377
162414
Actinomycetota
GAT
Ile
>WENV180127293
OATA01000778
288631
Actinomycetota
CCT
Arg
>WENV180128145
OATA01057288
257344
Actinomycetota
CAC
Val
>WENV180127303
OATA01000840
161068
Actinomycetota
>WENV180127662
OATA01003157
26694
Actinomycetota
TGA
Ser
>WENV180127002
OATA01000245
328213
Actinomycetota
GTT
Asn
>WENV180127483
OATA01001534
328213
Actinomycetota
GTT
Asn
>WENV180127503
OATA01001661
370050
Actinomycetota
TGT
Thr
>WENV180127617
OATA01002484
218329
Actinomycetota
CTT
Lys
>WENV180127756
OATA01004470
218329
Actinomycetota
CTT
Lys
>WENV180127610
OATA01002448
18632
Actinomycetota
GGA
Ser
>WENV180127505
OATA01001661
261300
Actinomycetota
GGT
Thr
>WENV180127543
OATA01001847
102952
Actinomycetota
CAG
Leu
>WENV180127352
OATA01000986
169995
Actinomycetota
GGG
Pro
>WENV180127905
OATA01008693
206829
Actinomycetota
>WENV180127261
OATA01000702
158695
Actinomycetota
ACG
Arg
>WENV180127262
OATA01000702
158695
Actinomycetota
ACG
Arg
>WENV180127705
OATA01003712
235582
Actinomycetota
TAC
Val
>WENV180127757
OATA01004517
162416
Actinomycetota
GTG
His
>WENV180127966
OATA01016039
449079
Actinomycetota
CTG
Gln
>WENV180127755
OATA01004441
448231
Actinomycetota
CCC
Gly
>WENV180127714
OATA01003862
124817
Actinomycetota
TAG
Leu
>WENV180127466
OATA01001399
261304
Actinomycetota
GAA
Phe
>WENV180127450
OATA01001366
49727
Actinomycetota
CGA
Ser
>WENV180127528
OATA01001781
162413
Actinomycetota
TTC
Glu
>WENV180127547
OATA01001860
162550
Actinomycetota
>WENV180127495
OATA01001580
261307
Actinomycetota
TAC
Val
>WENV180127854
OATA01007222
124776
Actinomycetota
TAG
Leu
>WENV180127814
OATA01005969
183611
Actinomycetota
GGG
Pro
>WENV180127315
OATA01000856
116981
Actinomycetota
GTA
Tyr
>WENV180127586
OATA01002229
257872
Actinomycetota
CGT
Thr
>WENV180127824
OATA01006240
65500
Actinomycetota
CAA
Leu
>WENV180127036
OATA01000277
158694
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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