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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
54 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180167953
OAVP01001466
270475
Bacillota
GAA
Phe
>WENV180167987
OAVP01001983
243647
Bacillota
TTT
Lys
>WENV180168121
OAVP01012836
243647
Bacillota
TTT
Lys
>WENV180168157
OAVP01025994
243647
Bacillota
TTT
Lys
>WENV180168098
OAVP01010794
361659
Bacillota
GCC
Gly
>WENV180167747
OAVP01000259
16842
Bacillota
CGA
Ser
>WENV180167995
OAVP01002172
242961
Bacillota
GGT
Thr
>WENV180168151
OAVP01021302
10912
Bacillota
GGA
Ser
>WENV180168097
OAVP01010794
114359
Bacillota
TAG
Leu
>WENV180168147
OAVP01019694
235294
Bacillota
TGC
Ala
>WENV180168017
OAVP01002895
81586
Bacillota
GAG
Leu
>WENV180167978
OAVP01001710
16834
Bacillota
GCT
Ser
>WENV180167869
OAVP01000726
16834
Bacillota
GCT
Ser
>WENV180167650
OAVP01000097
16834
Bacillota
GCT
Ser
>WENV180167838
OAVP01000532
16778
Bacillota
CGA
Ser
>WENV180167911
OAVP01001025
114002
Bacillota
CAA
Leu
>WENV180167532
OAVP01000009
114002
Bacillota
CAA
Leu
>WENV180168018
OAVP01003015
37437
Bacillota
TAA
Leu
>WENV180167543
OAVP01000016
37437
Bacillota
TAA
Leu
>WENV180168089
OAVP01009488
162028
Bacillota
ACG
Arg
>WENV180168031
OAVP01004487
243612
Bacillota
TAC
Val
>WENV180167989
OAVP01001983
243612
Bacillota
TAC
Val
>WENV180168070
OAVP01008484
144766
Bacillota
CAT
Met
>WENV180168052
OAVP01006668
147135
Bacillota
ACG
Arg
>WENV180167966
OAVP01001586
342895
Bacillota
CAT
Met
>WENV180167965
OAVP01001565
342895
Bacillota
CAT
Met
>WENV180167553
OAVP01000020
342895
Bacillota
CAT
Met
>WENV180168137
OAVP01017874
194150
Bacillota
TGG
Pro
>WENV180168100
OAVP01010794
150597
Bacillota
TCT
Arg
>WENV180167714
OAVP01000214
250349
Bacillota
GAA
Phe
>WENV180167540
OAVP01000016
250349
Bacillota
GAA
Phe
>WENV180168136
OAVP01017572
235701
Bacillota
TTT
Lys
>WENV180167713
OAVP01000214
235197
Bacillota
GTC
Asp
>WENV180167539
OAVP01000016
235197
Bacillota
GTC
Asp
>WENV180167798
OAVP01000364
342664
Bacillota
>WENV180168165
OAVP01030271
368876
Bacillota
GCC
Gly
>WENV180167541
OAVP01000016
368876
Bacillota
GCC
Gly
>WENV180168027
OAVP01004216
96872
Bacillota
>WENV180168094
OAVP01010794
235905
Bacillota
GTG
His
>WENV180168099
OAVP01010794
411739
Bacillota
TCC
Gly
>WENV180168072
OAVP01008484
163753
Bacillota
TGG
Pro
>WENV180168096
OAVP01010794
237963
Bacillota
TTT
Lys
>WENV180168085
OAVP01009488
101373
Bacillota
TAG
Leu
>WENV180168119
OAVP01012836
243613
Bacillota
GTG
His
>WENV180168104
OAVP01010872
152491
Bacillota
CAT
Met
>WENV180168065
OAVP01008484
144762
Bacillota
TCT
Arg
>WENV180168103
OAVP01010872
281472
Bacillota
GGT
Thr
>WENV180168139
OAVP01017874
178024
Bacillota
TCT
Arg
>WENV180168092
OAVP01009852
413657
Bacillota
CCC
Gly
>WENV180168084
OAVP01009488
253547
Bacillota
TTT
Lys
>WENV180168156
OAVP01025994
287034
Bacillota
GTT
Asn
>WENV180167986
OAVP01001983
287034
Bacillota
GTT
Asn
>WENV180168120
OAVP01012836
343027
Bacillota
TTG
Gln
>WENV180168149
OAVP01020080
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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