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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180460976
OBXZ01003177
235146
Actinomycetota
CGT
Thr
>WENV180460393
OBXZ01000259
119475
Actinomycetota
TAA
Leu
>WENV180461321
OBXZ01075506
235347
Actinomycetota
GGC
Ala
>WENV180460675
OBXZ01000805
166493
Actinomycetota
CTT
Lys
>WENV180461074
OBXZ01007447
166493
Actinomycetota
CTT
Lys
>WENV180460411
OBXZ01000285
235153
Actinomycetota
CCT
Arg
>WENV180460266
OBXZ01000134
144589
Actinomycetota
ACG
Arg
>WENV180460267
OBXZ01000134
144589
Actinomycetota
ACG
Arg
>WENV180460748
OBXZ01001075
144589
Actinomycetota
ACG
Arg
>WENV180460749
OBXZ01001075
144589
Actinomycetota
ACG
Arg
>WENV180460754
OBXZ01001108
16400
Actinomycetota
GAG
Leu
>WENV180460605
OBXZ01000600
37070
Actinomycetota
CGA
Ser
>WENV180461055
OBXZ01006041
144600
Actinomycetota
TGG
Pro
>WENV180460851
OBXZ01001812
235092
Actinomycetota
CCG
Arg
>WENV180461171
OBXZ01017771
273786
Actinomycetota
CGT
Thr
>WENV180460255
OBXZ01000126
245301
Actinomycetota
GCC
Gly
>WENV180460254
OBXZ01000126
245301
Actinomycetota
GCC
Gly
>WENV180460252
OBXZ01000126
245301
Actinomycetota
GCC
Gly
>WENV180461027
OBXZ01004812
411601
Actinomycetota
CCC
Gly
>WENV180461081
OBXZ01007749
338239
Actinomycetota
TTC
Glu
>WENV180461073
OBXZ01007288
338239
Actinomycetota
TTC
Glu
>WENV180460315
OBXZ01000180
162208
Actinomycetota
TAC
Val
>WENV180461029
OBXZ01004881
16219
Actinomycetota
GCT
Ser
>WENV180460844
OBXZ01001690
16219
Actinomycetota
GCT
Ser
>WENV180460694
OBXZ01000850
16219
Actinomycetota
GCT
Ser
>WENV180460890
OBXZ01002288
235174
Actinomycetota
TGC
Ala
>WENV180460721
OBXZ01000962
235174
Actinomycetota
TGC
Ala
>WENV180460554
OBXZ01000498
235174
Actinomycetota
TGC
Ala
>WENV180460510
OBXZ01000415
235174
Actinomycetota
TGC
Ala
>WENV180460518
OBXZ01000427
235101
Actinomycetota
TTT
Lys
>WENV180460372
OBXZ01000238
235101
Actinomycetota
TTT
Lys
>WENV180460977
OBXZ01003301
121510
Actinomycetota
TAA
Leu
>WENV180461155
OBXZ01014874
356045
Actinomycetota
GAC
Val
>WENV180460620
OBXZ01000624
144625
Actinomycetota
GTC
Asp
>WENV180460618
OBXZ01000624
144625
Actinomycetota
GTC
Asp
>WENV180460514
OBXZ01000419
145423
Actinomycetota
TCT
Arg
>WENV180460390
OBXZ01000253
147732
Actinomycetota
GTC
Asp
>WENV180460981
OBXZ01003438
153948
Actinomycetota
GGG
Pro
>WENV180461079
OBXZ01007718
44855
Actinomycetota
TGA
Ser
>WENV180460862
OBXZ01001932
145345
Actinomycetota
TAC
Val
>WENV180460122
OBXZ01000041
145345
Actinomycetota
TAC
Val
>WENV180461163
OBXZ01016862
235199
Actinomycetota
CAC
Val
>WENV180460838
OBXZ01001596
44862
Actinomycetota
CGA
Ser
>WENV180461139
OBXZ01012670
413665
Actinomycetota
TTG
Gln
>WENV180460723
OBXZ01000973
413665
Actinomycetota
TTG
Gln
>WENV180460296
OBXZ01000162
254857
Actinomycetota
CCG
Arg
>WENV180460513
OBXZ01000417
16223
Actinomycetota
GAG
Leu
>WENV180460382
OBXZ01000244
16223
Actinomycetota
GAG
Leu
>WENV180460587
OBXZ01000554
144593
Actinomycetota
TAT
Ile
>WENV180460933
OBXZ01002618
113703
Actinomycetota
TAG
Leu
>WENV180460388
OBXZ01000253
44942
Actinomycetota
TGA
Ser
>WENV180460323
OBXZ01000188
144636
Actinomycetota
GAT
Ile
>WENV180460321
OBXZ01000188
144636
Actinomycetota
GAT
Ile
>WENV180461107
OBXZ01008853
243671
Actinomycetota
CTC
Glu
>WENV180460808
OBXZ01001348
45147
Actinomycetota
CGA
Ser
>WENV180460707
OBXZ01000920
98279
Actinomycetota
GTA
Tyr
>WENV180460361
OBXZ01000230
338148
Actinomycetota
CTG
Gln
>WENV180460330
OBXZ01000201
338148
Actinomycetota
CTG
Gln
>WENV180461108
OBXZ01008853
338148
Actinomycetota
CTG
Gln
>WENV180460875
OBXZ01002129
235148
Actinomycetota
GTT
Asn
>WENV180460459
OBXZ01000350
235148
Actinomycetota
GTT
Asn
>WENV180460458
OBXZ01000350
235148
Actinomycetota
GTT
Asn
>WENV180460243
OBXZ01000122
235148
Actinomycetota
GTT
Asn
>WENV180460241
OBXZ01000122
235148
Actinomycetota
GTT
Asn
>WENV180460240
OBXZ01000122
235148
Actinomycetota
GTT
Asn
>WENV180460913
OBXZ01002481
237792
Actinomycetota
CCT
Arg
>WENV180460894
OBXZ01002371
113702
Actinomycetota
TAA
Leu
>WENV180460594
OBXZ01000562
176456
Actinomycetota
TCT
Arg
>WENV180461036
OBXZ01005055
144825
Actinomycetota
CAT
Met
>WENV180460635
OBXZ01000674
145347
Actinomycetota
CAA
Leu
>WENV180460229
OBXZ01000111
338139
Actinomycetota
GTT
Asn
>WENV180460228
OBXZ01000111
338139
Actinomycetota
GTT
Asn
>WENV180461019
OBXZ01004454
235348
Actinomycetota
CCT
Arg
>WENV180460793
OBXZ01001208
37521
Actinomycetota
GCT
Ser
>WENV180460807
OBXZ01001317
237794
Actinomycetota
CCG
Arg
>WENV180460929
OBXZ01002586
411554
Actinomycetota
CCC
Gly
>WENV180460615
OBXZ01000617
411554
Actinomycetota
CCC
Gly
>WENV180460583
OBXZ01000542
411554
Actinomycetota
CCC
Gly
>WENV180461172
OBXZ01017771
113601
Actinomycetota
TAG
Leu
>WENV180460363
OBXZ01000230
113601
Actinomycetota
TAG
Leu
>WENV180460332
OBXZ01000201
113601
Actinomycetota
TAG
Leu
>WENV180461062
OBXZ01006785
144595
Actinomycetota
CAA
Leu
>WENV180460847
OBXZ01001716
144595
Actinomycetota
CAA
Leu
>WENV180460689
OBXZ01000838
144595
Actinomycetota
CAA
Leu
>WENV180460873
OBXZ01002096
145343
Actinomycetota
GGG
Pro
>WENV180460728
OBXZ01001012
145343
Actinomycetota
GGG
Pro
>WENV180460466
OBXZ01000356
145343
Actinomycetota
GGG
Pro
>WENV180460717
OBXZ01000942
235149
Actinomycetota
CCT
Arg
>WENV180460123
OBXZ01000041
235149
Actinomycetota
CCT
Arg
>WENV180460806
OBXZ01001315
51286
Actinomycetota
TGA
Ser
>WENV180460519
OBXZ01000431
414234
Actinomycetota
CTG
Gln
>WENV180460602
OBXZ01000590
145269
Actinomycetota
CAT
Met
>WENV180460932
OBXZ01002618
235121
Actinomycetota
CGT
Thr
>WENV180460362
OBXZ01000230
235121
Actinomycetota
CGT
Thr
>WENV180460331
OBXZ01000201
235121
Actinomycetota
CGT
Thr
>WENV180461058
OBXZ01006579
47164
Actinomycetota
GGA
Ser
>WENV180460920
OBXZ01002533
47164
Actinomycetota
GGA
Ser
>WENV180461282
OBXZ01052988
144635
Actinomycetota
TGG
Pro
>WENV180460498
OBXZ01000406
61501
Actinomycetota
CAG
Leu
>WENV180460327
OBXZ01000191
119485
Actinomycetota
TAA
Leu
>WENV180460803
OBXZ01001259
80622
Actinomycetota
CAG
Leu
>WENV180460616
OBXZ01000617
80622
Actinomycetota
CAG
Leu
>WENV180460584
OBXZ01000542
80622
Actinomycetota
CAG
Leu
>WENV180461017
OBXZ01004402
80622
Actinomycetota
CAG
Leu
>WENV180460659
OBXZ01000750
44851
Actinomycetota
TGA
Ser
>WENV180460225
OBXZ01000110
158513
Actinomycetota
TGG
Pro
>WENV180460994
OBXZ01003502
163948
Actinomycetota
CAT
Met
>WENV180460253
OBXZ01000126
412834
Actinomycetota
GCA
Cys
>WENV180460996
OBXZ01003548
235173
Actinomycetota
GGC
Ala
>WENV180460716
OBXZ01000937
235173
Actinomycetota
GGC
Ala
>WENV180460555
OBXZ01000498
235173
Actinomycetota
GGC
Ala
>WENV180460511
OBXZ01000415
235173
Actinomycetota
GGC
Ala
>WENV180460242
OBXZ01000122
235173
Actinomycetota
GGC
Ala
>WENV180460876
OBXZ01002138
243162
Actinomycetota
GTT
Asn
>WENV180460871
OBXZ01002069
243162
Actinomycetota
GTT
Asn
>WENV180460837
OBXZ01001589
278447
Actinomycetota
GTG
His
>WENV180460419
OBXZ01000303
278447
Actinomycetota
GTG
His
>WENV180460860
OBXZ01001888
183544
Actinomycetota
CAT
Met
>WENV180460825
OBXZ01001463
267574
Actinomycetota
CAC
Val
>WENV180461066
OBXZ01007129
95593
Actinomycetota
>WENV180460814
OBXZ01001377
95593
Actinomycetota
>WENV180460799
OBXZ01001235
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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