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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180460087
OBXZ01000022
235097
Bacteroidota
TTT
Lys
>WENV180460371
OBXZ01000237
235097
Bacteroidota
TTT
Lys
>WENV180460454
OBXZ01000347
235097
Bacteroidota
TTT
Lys
>WENV180460831
OBXZ01001494
235097
Bacteroidota
TTT
Lys
>WENV180460144
OBXZ01000062
235102
Bacteroidota
CGT
Thr
>WENV180460194
OBXZ01000087
144657
Bacteroidota
CGG
Pro
>WENV180460712
OBXZ01000929
338155
Bacteroidota
CTC
Glu
>WENV180461227
OBXZ01033144
338155
Bacteroidota
CTC
Glu
>WENV180460301
OBXZ01000171
339341
Bacteroidota
GGT
Thr
>WENV180460310
OBXZ01000175
343138
Bacteroidota
CCT
Arg
>WENV180460288
OBXZ01000153
58715
Bacteroidota
GAG
Leu
>WENV180460236
OBXZ01000117
46165
Bacteroidota
TGA
Ser
>WENV180460131
OBXZ01000050
95618
Bacteroidota
TAG
Leu
>WENV180460407
OBXZ01000278
338486
Bacteroidota
CAT
Met
>WENV180460105
OBXZ01000037
338486
Bacteroidota
CAT
Met
>WENV180460671
OBXZ01000784
415410
Bacteroidota
TTG
Gln
>WENV180460358
OBXZ01000224
415410
Bacteroidota
TTG
Gln
>WENV180460086
OBXZ01000021
415410
Bacteroidota
TTG
Gln
>WENV180460140
OBXZ01000055
411543
Bacteroidota
CTG
Gln
>WENV180460287
OBXZ01000153
59689
Bacteroidota
CAG
Leu
>WENV180460192
OBXZ01000087
59689
Bacteroidota
CAG
Leu
>WENV180461296
OBXZ01057592
188343
Bacteroidota
TGC
Ala
>WENV180460211
OBXZ01000095
235182
Bacteroidota
>WENV180460092
OBXZ01000024
272983
Bacteroidota
CGT
Thr
>WENV180460545
OBXZ01000472
338124
Bacteroidota
CCG
Arg
>WENV180460367
OBXZ01000234
235203
Bacteroidota
TTT
Lys
>WENV180460117
OBXZ01000039
235203
Bacteroidota
TTT
Lys
>WENV180460235
OBXZ01000117
238121
Bacteroidota
CTT
Lys
>WENV180460718
OBXZ01000943
338132
Bacteroidota
GCA
Cys
>WENV180460500
OBXZ01000408
338132
Bacteroidota
GCA
Cys
>WENV180460341
OBXZ01000210
338132
Bacteroidota
GCA
Cys
>WENV180460220
OBXZ01000104
338132
Bacteroidota
GCA
Cys
>WENV180460134
OBXZ01000051
338132
Bacteroidota
GCA
Cys
>WENV180460410
OBXZ01000283
144688
Bacteroidota
CAT
Met
>WENV180460412
OBXZ01000294
45423
Bacteroidota
TGA
Ser
>WENV180460079
OBXZ01000016
181746
Bacteroidota
GGC
Ala
>WENV180460234
OBXZ01000117
58714
Bacteroidota
CAA
Leu
>WENV180460054
OBXZ01000005
144933
Bacteroidota
TCT
Arg
>WENV180460415
OBXZ01000295
144656
Bacteroidota
GTG
His
>WENV180460742
OBXZ01001043
235207
Bacteroidota
CAT
Met
>WENV180460366
OBXZ01000232
235207
Bacteroidota
CAT
Met
>WENV180460348
OBXZ01000212
235207
Bacteroidota
CAT
Met
>WENV180460560
OBXZ01000511
144659
Bacteroidota
GTG
His
>WENV180460559
OBXZ01000511
144659
Bacteroidota
GTG
His
>WENV180460195
OBXZ01000087
235180
Bacteroidota
CCA
Trp
>WENV180460076
OBXZ01000015
144596
Bacteroidota
GGC
Ala
>WENV180461288
OBXZ01054979
80607
Bacteroidota
GTA
Tyr
>WENV180460586
OBXZ01000553
80607
Bacteroidota
GTA
Tyr
>WENV180460075
OBXZ01000014
80607
Bacteroidota
GTA
Tyr
>WENV180460679
OBXZ01000807
113604
Bacteroidota
>WENV180460677
OBXZ01000807
113604
Bacteroidota
>WENV180460096
OBXZ01000028
16999
Bacteroidota
GGA
Ser
>WENV180460538
OBXZ01000463
80614
Bacteroidota
>WENV180460204
OBXZ01000091
80614
Bacteroidota
>WENV180460119
OBXZ01000039
80614
Bacteroidota
>WENV180460930
OBXZ01002597
144590
Bacteroidota
GTT
Asn
>WENV180460778
OBXZ01001165
95559
Bacteroidota
TAG
Leu
>WENV180460485
OBXZ01000396
419272
Bacteroidota
CTG
Gln
>WENV180460159
OBXZ01000070
144655
Bacteroidota
GGC
Ala
>WENV180460309
OBXZ01000175
338164
Bacteroidota
TTC
Glu
>WENV180460308
OBXZ01000175
338164
Bacteroidota
TTC
Glu
>WENV180460237
OBXZ01000117
95875
Bacteroidota
TAG
Leu
>WENV180460163
OBXZ01000072
338314
Bacteroidota
CCT
Arg
>WENV180460103
OBXZ01000036
240012
Bacteroidota
CCC
Gly
>WENV180460306
OBXZ01000173
44852
Bacteroidota
TAA
Leu
>WENV180460395
OBXZ01000261
147439
Bacteroidota
TCT
Arg
>WENV180460338
OBXZ01000208
411550
Bacteroidota
CTG
Gln
>WENV180460337
OBXZ01000208
411550
Bacteroidota
CTG
Gln
>WENV180460788
OBXZ01001190
338165
Bacteroidota
GGT
Thr
>WENV180460414
OBXZ01000295
50727
Bacteroidota
TGA
Ser
>WENV180460405
OBXZ01000275
50727
Bacteroidota
TGA
Ser
>WENV180460404
OBXZ01000275
50727
Bacteroidota
TGA
Ser
>WENV180460334
OBXZ01000203
50727
Bacteroidota
TGA
Ser
>WENV180460486
OBXZ01000396
132360
Bacteroidota
GGG
Pro
>WENV180460356
OBXZ01000218
132360
Bacteroidota
GGG
Pro
>WENV180460139
OBXZ01000055
132360
Bacteroidota
GGG
Pro
>WENV180460083
OBXZ01000018
132360
Bacteroidota
GGG
Pro
>WENV180460355
OBXZ01000218
425638
Bacteroidota
CTG
Gln
>WENV180460082
OBXZ01000018
425638
Bacteroidota
CTG
Gln
>WENV180460066
OBXZ01000010
425638
Bacteroidota
CTG
Gln
>WENV180460050
OBXZ01000004
19317
Bacteroidota
GGA
Ser
>WENV180460146
OBXZ01000065
185921
Bacteroidota
GTC
Asp
>WENV180460145
OBXZ01000065
185921
Bacteroidota
GTC
Asp
>WENV180461226
OBXZ01033144
23696
Bacteroidota
GCT
Ser
>WENV180460340
OBXZ01000210
23696
Bacteroidota
GCT
Ser
>WENV180460522
OBXZ01000435
16224
Bacteroidota
GGA
Ser
>WENV180460088
OBXZ01000022
16224
Bacteroidota
GGA
Ser
>WENV180460298
OBXZ01000169
16220
Bacteroidota
GGA
Ser
>WENV180460127
OBXZ01000047
338125
Bacteroidota
CCT
Arg
>WENV180460121
OBXZ01000040
338125
Bacteroidota
CCT
Arg
>WENV180460533
OBXZ01000451
235129
Bacteroidota
GCC
Gly
>WENV180460286
OBXZ01000153
235129
Bacteroidota
GCC
Gly
>WENV180460282
OBXZ01000151
235129
Bacteroidota
GCC
Gly
>WENV180460199
OBXZ01000088
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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