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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
67 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180462341
OBYB01001307
235146
Actinomycetota
CGT
Thr
>WENV180462337
OBYB01001294
235347
Actinomycetota
GGC
Ala
>WENV180462342
OBYB01001317
144589
Actinomycetota
ACG
Arg
>WENV180462343
OBYB01001317
144589
Actinomycetota
ACG
Arg
>WENV180462200
OBYB01000439
201717
Actinomycetota
CTT
Lys
>WENV180462506
OBYB01004452
144600
Actinomycetota
TGG
Pro
>WENV180462319
OBYB01001146
235194
Actinomycetota
GTG
His
>WENV180462377
OBYB01001631
158720
Actinomycetota
ACG
Arg
>WENV180462376
OBYB01001631
158720
Actinomycetota
ACG
Arg
>WENV180462470
OBYB01003327
411601
Actinomycetota
CCC
Gly
>WENV180462490
OBYB01004000
144826
Actinomycetota
GGG
Pro
>WENV180462255
OBYB01000721
23370
Actinomycetota
GCT
Ser
>WENV180462263
OBYB01000778
174149
Actinomycetota
GAT
Ile
>WENV180462471
OBYB01003422
338239
Actinomycetota
TTC
Glu
>WENV180462451
OBYB01002749
338239
Actinomycetota
TTC
Glu
>WENV180462406
OBYB01001973
162208
Actinomycetota
TAC
Val
>WENV180462264
OBYB01000778
235174
Actinomycetota
TGC
Ala
>WENV180462315
OBYB01001117
235101
Actinomycetota
TTT
Lys
>WENV180462212
OBYB01000523
121510
Actinomycetota
TAA
Leu
>WENV180462558
OBYB01008060
356045
Actinomycetota
GAC
Val
>WENV180462458
OBYB01002771
356045
Actinomycetota
GAC
Val
>WENV180462455
OBYB01002771
356045
Actinomycetota
GAC
Val
>WENV180462409
OBYB01001974
356045
Actinomycetota
GAC
Val
>WENV180462515
OBYB01004969
145423
Actinomycetota
TCT
Arg
>WENV180462474
OBYB01003447
145423
Actinomycetota
TCT
Arg
>WENV180462530
OBYB01005815
147732
Actinomycetota
GTC
Asp
>WENV180462529
OBYB01005815
147732
Actinomycetota
GTC
Asp
>WENV180462247
OBYB01000666
44855
Actinomycetota
TGA
Ser
>WENV180462559
OBYB01008060
235199
Actinomycetota
CAC
Val
>WENV180462410
OBYB01001974
235199
Actinomycetota
CAC
Val
>WENV180462251
OBYB01000713
44862
Actinomycetota
CGA
Ser
>WENV180462339
OBYB01001307
313386
Actinomycetota
CGT
Thr
>WENV180462437
OBYB01002490
121514
Actinomycetota
TAA
Leu
>WENV180462336
OBYB01001294
413665
Actinomycetota
TTG
Gln
>WENV180462316
OBYB01001118
254857
Actinomycetota
CCG
Arg
>WENV180462567
OBYB01008956
144700
Actinomycetota
CAT
Met
>WENV180462254
OBYB01000721
144700
Actinomycetota
CAT
Met
>WENV180462435
OBYB01002464
295695
Actinomycetota
CTC
Glu
>WENV180462330
OBYB01001248
295695
Actinomycetota
CTC
Glu
>WENV180462331
OBYB01001248
338148
Actinomycetota
CTG
Gln
>WENV180462329
OBYB01001248
53078
Actinomycetota
GGA
Ser
>WENV180462317
OBYB01001121
53078
Actinomycetota
GGA
Ser
>WENV180462308
OBYB01001032
144825
Actinomycetota
CAT
Met
>WENV180462467
OBYB01003162
412399
Actinomycetota
CCC
Gly
>WENV180462572
OBYB01009168
119508
Actinomycetota
TAA
Leu
>WENV180462215
OBYB01000541
235348
Actinomycetota
CCT
Arg
>WENV180462524
OBYB01005358
16467
Actinomycetota
GCT
Ser
>WENV180462381
OBYB01001677
38674
Actinomycetota
CGA
Ser
>WENV180462340
OBYB01001307
113601
Actinomycetota
TAG
Leu
>WENV180462354
OBYB01001438
144595
Actinomycetota
CAA
Leu
>WENV180462318
OBYB01001142
147225
Actinomycetota
CAA
Leu
>WENV180462504
OBYB01004449
235121
Actinomycetota
CGT
Thr
>WENV180462629
OBYB01014357
80622
Actinomycetota
CAG
Leu
>WENV180462483
OBYB01003797
44851
Actinomycetota
TGA
Ser
>WENV180462436
OBYB01002464
356597
Actinomycetota
CTG
Gln
>WENV180462385
OBYB01001739
16222
Actinomycetota
GAG
Leu
>WENV180462383
OBYB01001707
163948
Actinomycetota
CAT
Met
>WENV180462356
OBYB01001452
235173
Actinomycetota
GGC
Ala
>WENV180462355
OBYB01001452
235173
Actinomycetota
GGC
Ala
>WENV180462384
OBYB01001709
418393
Actinomycetota
TCC
Gly
>WENV180462658
OBYB01020386
243162
Actinomycetota
GTT
Asn
>WENV180462571
OBYB01009062
243162
Actinomycetota
GTT
Asn
>WENV180462505
OBYB01004449
113739
Actinomycetota
TAG
Leu
>WENV180462456
OBYB01002771
267574
Actinomycetota
CAC
Val
>WENV180462566
OBYB01008956
95593
Actinomycetota
>WENV180462253
OBYB01000721
95593
Actinomycetota
>WENV180462280
OBYB01000896
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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