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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180469254
OBYM01001041
196621
Bacillota
GTC
Asp
>WENV180469359
OBYM01001825
196621
Bacillota
GTC
Asp
>WENV180470092
OBYM01058659
202812
Bacillota
CAT
Met
>WENV180469336
OBYM01001639
309417
Bacillota
GGC
Ala
>WENV180469401
OBYM01002076
309417
Bacillota
GGC
Ala
>WENV180469406
OBYM01002099
309417
Bacillota
GGC
Ala
>WENV180469442
OBYM01002519
309417
Bacillota
GGC
Ala
>WENV180469945
OBYM01028756
158247
Bacillota
>WENV180469031
OBYM01000236
144612
Bacillota
TCT
Arg
>WENV180469197
OBYM01000875
144612
Bacillota
TCT
Arg
>WENV180469250
OBYM01001040
144612
Bacillota
TCT
Arg
>WENV180469913
OBYM01026715
144612
Bacillota
TCT
Arg
>WENV180470113
OBYM01066136
144612
Bacillota
TCT
Arg
>WENV180470053
OBYM01045962
156189
Bacillota
GAT
Ile
>WENV180469308
OBYM01001381
235098
Bacillota
GAC
Val
>WENV180469204
OBYM01000900
235098
Bacillota
GAC
Val
>WENV180468974
OBYM01000144
235098
Bacillota
GAC
Val
>WENV180468952
OBYM01000124
235098
Bacillota
GAC
Val
>WENV180469007
OBYM01000205
44854
Bacillota
TGA
Ser
>WENV180468994
OBYM01000176
44854
Bacillota
TGA
Ser
>WENV180470121
OBYM01067398
235154
Bacillota
GTT
Asn
>WENV180469435
OBYM01002415
241441
Bacillota
GCC
Gly
>WENV180469974
OBYM01033515
144577
Bacillota
GAT
Ile
>WENV180469960
OBYM01030943
144577
Bacillota
GAT
Ile
>WENV180469953
OBYM01029538
144577
Bacillota
GAT
Ile
>WENV180470168
OBYM01082702
304022
Bacillota
GCC
Gly
>WENV180469986
OBYM01034873
304022
Bacillota
GCC
Gly
>WENV180469479
OBYM01003220
304022
Bacillota
GCC
Gly
>WENV180469428
OBYM01002356
304022
Bacillota
GCC
Gly
>WENV180469398
OBYM01002045
304022
Bacillota
GCC
Gly
>WENV180469360
OBYM01001825
304022
Bacillota
GCC
Gly
>WENV180469358
OBYM01001825
304022
Bacillota
GCC
Gly
>WENV180469330
OBYM01001595
304022
Bacillota
GCC
Gly
>WENV180470201
OBYM01113411
246023
Bacillota
TGC
Ala
>WENV180470126
OBYM01067916
246023
Bacillota
TGC
Ala
>WENV180469872
OBYM01021536
246023
Bacillota
TGC
Ala
>WENV180469780
OBYM01015150
307003
Bacillota
TGC
Ala
>WENV180469626
OBYM01006591
238910
Bacillota
CTT
Lys
>WENV180469498
OBYM01003612
238910
Bacillota
CTT
Lys
>WENV180469733
OBYM01010767
235137
Bacillota
TGC
Ala
>WENV180469896
OBYM01024665
281701
Bacillota
TGC
Ala
>WENV180469890
OBYM01023631
341763
Bacillota
CTC
Glu
>WENV180470211
OBYM01124292
313454
Bacillota
GAA
Phe
>WENV180468955
OBYM01000125
243227
Bacillota
GTT
Asn
>WENV180469580
OBYM01005371
11034
Bacillota
GGA
Ser
>WENV180469241
OBYM01000960
11034
Bacillota
GGA
Ser
>WENV180470237
OBYM01128749
235117
Bacillota
TAC
Val
>WENV180469660
OBYM01007724
235117
Bacillota
TAC
Val
>WENV180469773
OBYM01014109
274189
Bacillota
TGT
Thr
>WENV180469149
OBYM01000673
274189
Bacillota
TGT
Thr
>WENV180470232
OBYM01128412
235079
Bacillota
GAA
Phe
>WENV180470224
OBYM01125264
235079
Bacillota
GAA
Phe
>WENV180470000
OBYM01036361
235079
Bacillota
GAA
Phe
>WENV180469427
OBYM01002356
235079
Bacillota
GAA
Phe
>WENV180469391
OBYM01001990
235079
Bacillota
GAA
Phe
>WENV180469388
OBYM01001974
235079
Bacillota
GAA
Phe
>WENV180469357
OBYM01001825
235079
Bacillota
GAA
Phe
>WENV180469272
OBYM01001141
235079
Bacillota
GAA
Phe
>WENV180468786
OBYM01000002
235079
Bacillota
GAA
Phe
>WENV180469973
OBYM01033515
235087
Bacillota
TGC
Ala
>WENV180469902
OBYM01024929
173314
Bacillota
GAT
Ile
>WENV180469846
OBYM01019757
338149
Bacillota
CTC
Glu
>WENV180469304
OBYM01001368
338149
Bacillota
CTC
Glu
>WENV180469092
OBYM01000423
338149
Bacillota
CTC
Glu
>WENV180469723
OBYM01010544
245298
Bacillota
CGG
Pro
>WENV180469213
OBYM01000921
245298
Bacillota
CGG
Pro
>WENV180470171
OBYM01083751
413152
Bacillota
TCC
Gly
>WENV180469927
OBYM01027673
413152
Bacillota
TCC
Gly
>WENV180469456
OBYM01002911
413152
Bacillota
TCC
Gly
>WENV180469078
OBYM01000357
413152
Bacillota
TCC
Gly
>WENV180469024
OBYM01000231
152149
Bacillota
GTG
His
>WENV180470220
OBYM01125036
201704
Bacillota
GAT
Ile
>WENV180469871
OBYM01021536
201704
Bacillota
GAT
Ile
>WENV180469722
OBYM01010544
411547
Bacillota
CTG
Gln
>WENV180469413
OBYM01002176
411547
Bacillota
CTG
Gln
>WENV180469212
OBYM01000921
411547
Bacillota
CTG
Gln
>WENV180469008
OBYM01000205
4624
Bacillota
GCT
Ser
>WENV180468995
OBYM01000176
4624
Bacillota
GCT
Ser
>WENV180470098
OBYM01063477
313104
Bacillota
TAC
Val
>WENV180469256
OBYM01001041
235095
Bacillota
GGT
Thr
>WENV180469255
OBYM01001041
235095
Bacillota
GGT
Thr
>WENV180469180
OBYM01000828
235095
Bacillota
GGT
Thr
>WENV180469127
OBYM01000587
235095
Bacillota
GGT
Thr
>WENV180469332
OBYM01001595
411549
Bacillota
TTG
Gln
>WENV180469203
OBYM01000899
411549
Bacillota
TTG
Gln
>WENV180470040
OBYM01044237
245386
Bacillota
CCA
Trp
>WENV180469264
OBYM01001121
245386
Bacillota
CCA
Trp
>WENV180468779
OBYM01000001
245386
Bacillota
CCA
Trp
>WENV180469768
OBYM01013704
148188
Bacillota
CCG
Arg
>WENV180469443
OBYM01002547
148188
Bacillota
CCG
Arg
>WENV180469123
OBYM01000573
148188
Bacillota
CCG
Arg
>WENV180469262
OBYM01001121
298639
Bacillota
GTT
Asn
>WENV180469528
OBYM01004298
80612
Bacillota
GTA
Tyr
>WENV180469184
OBYM01000844
80612
Bacillota
GTA
Tyr
>WENV180470225
OBYM01125357
163943
Bacillota
GTC
Asp
>WENV180469994
OBYM01035113
298620
Bacillota
CAT
Met
>WENV180469515
OBYM01004027
235124
Bacillota
TGG
Pro
>WENV180468973
OBYM01000144
235124
Bacillota
TGG
Pro
>WENV180469314
OBYM01001404
338129
Bacillota
TGT
Thr
>WENV180469624
OBYM01006585
157838
Bacillota
GTC
Asp
>WENV180469532
OBYM01004317
157838
Bacillota
GTC
Asp
>WENV180469124
OBYM01000576
157838
Bacillota
GTC
Asp
>WENV180469095
OBYM01000425
157838
Bacillota
GTC
Asp
>WENV180469424
OBYM01002340
144583
Bacillota
ACG
Arg
>WENV180469214
OBYM01000923
144583
Bacillota
ACG
Arg
>WENV180469629
OBYM01006803
320668
Bacillota
CTT
Lys
>WENV180469139
OBYM01000618
320668
Bacillota
CTT
Lys
>WENV180468814
OBYM01000011
320668
Bacillota
CTT
Lys
>WENV180469539
OBYM01004436
235171
Bacillota
CCA
Trp
>WENV180469397
OBYM01002023
144621
Bacillota
GTT
Asn
>WENV180469305
OBYM01001368
144621
Bacillota
GTT
Asn
>WENV180469093
OBYM01000423
144621
Bacillota
GTT
Asn
>WENV180469064
OBYM01000318
144621
Bacillota
GTT
Asn
>WENV180470175
OBYM01084733
295033
Bacillota
GAA
Phe
>WENV180469444
OBYM01002552
58712
Bacillota
CAG
Leu
>WENV180469268
OBYM01001129
58712
Bacillota
CAG
Leu
>WENV180469199
OBYM01000878
58712
Bacillota
CAG
Leu
>WENV180469172
OBYM01000794
58712
Bacillota
CAG
Leu
>WENV180469527
OBYM01004245
245296
Bacillota
CCC
Gly
>WENV180469355
OBYM01001793
245296
Bacillota
CCC
Gly
>WENV180469847
OBYM01019757
272992
Bacillota
CTT
Lys
>WENV180469897
OBYM01024665
198135
Bacillota
GAT
Ile
>WENV180469609
OBYM01006230
198135
Bacillota
GAT
Ile
>WENV180469762
OBYM01013463
248965
Bacillota
GCC
Gly
>WENV180470202
OBYM01114393
299139
Bacillota
TGC
Ala
>WENV180470117
OBYM01066493
299139
Bacillota
TGC
Ala
>WENV180469877
OBYM01021998
299139
Bacillota
TGC
Ala
>WENV180469798
OBYM01016624
299139
Bacillota
TGC
Ala
>WENV180469616
OBYM01006405
299139
Bacillota
TGC
Ala
>WENV180469244
OBYM01000993
144594
Bacillota
CAC
Val
>WENV180469033
OBYM01000236
144594
Bacillota
CAC
Val
>WENV180469918
OBYM01027214
338131
Bacillota
GCC
Gly
>WENV180469462
OBYM01002945
338128
Bacillota
TTC
Glu
>WENV180469394
OBYM01001992
338128
Bacillota
TTC
Glu
>WENV180469313
OBYM01001400
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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