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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180499953
OCAI01000914
196621
Bacillota
GTC
Asp
>WENV180499966
OCAI01000941
196621
Bacillota
GTC
Asp
>WENV180500011
OCAI01001195
196621
Bacillota
GTC
Asp
>WENV180500071
OCAI01001680
196621
Bacillota
GTC
Asp
>WENV180500256
OCAI01005274
196621
Bacillota
GTC
Asp
>WENV180499888
OCAI01000668
309417
Bacillota
GGC
Ala
>WENV180500272
OCAI01005805
309417
Bacillota
GGC
Ala
>WENV180500492
OCAI01043428
309417
Bacillota
GGC
Ala
>WENV180500096
OCAI01001883
144612
Bacillota
TCT
Arg
>WENV180500426
OCAI01023631
154063
Bacillota
CGG
Pro
>WENV180499523
OCAI01000052
267649
Bacillota
TAC
Val
>WENV180499660
OCAI01000167
267649
Bacillota
TAC
Val
>WENV180500018
OCAI01001206
267556
Bacillota
TAC
Val
>WENV180500499
OCAI01048132
235098
Bacillota
GAC
Val
>WENV180500206
OCAI01003624
235098
Bacillota
GAC
Val
>WENV180500156
OCAI01002767
235098
Bacillota
GAC
Val
>WENV180500142
OCAI01002534
235098
Bacillota
GAC
Val
>WENV180500054
OCAI01001561
235098
Bacillota
GAC
Val
>WENV180500304
OCAI01007768
338152
Bacillota
TTC
Glu
>WENV180500078
OCAI01001702
44854
Bacillota
TGA
Ser
>WENV180499978
OCAI01001005
44854
Bacillota
TGA
Ser
>WENV180500540
OCAI01087325
235154
Bacillota
GTT
Asn
>WENV180500518
OCAI01056287
144577
Bacillota
GAT
Ile
>WENV180500300
OCAI01007685
37071
Bacillota
TGA
Ser
>WENV180500112
OCAI01002100
37071
Bacillota
TGA
Ser
>WENV180500254
OCAI01005274
304022
Bacillota
GCC
Gly
>WENV180500144
OCAI01002543
304022
Bacillota
GCC
Gly
>WENV180500072
OCAI01001680
304022
Bacillota
GCC
Gly
>WENV180500070
OCAI01001680
304022
Bacillota
GCC
Gly
>WENV180500032
OCAI01001323
304022
Bacillota
GCC
Gly
>WENV180499955
OCAI01000914
304022
Bacillota
GCC
Gly
>WENV180499951
OCAI01000914
304022
Bacillota
GCC
Gly
>WENV180500408
OCAI01019477
246023
Bacillota
TGC
Ala
>WENV180499820
OCAI01000489
59312
Bacillota
CAG
Leu
>WENV180500279
OCAI01006297
238910
Bacillota
CTT
Lys
>WENV180499827
OCAI01000508
338147
Bacillota
CTC
Glu
>WENV180500450
OCAI01029826
235150
Bacillota
TGC
Ala
>WENV180500209
OCAI01003685
235150
Bacillota
TGC
Ala
>WENV180500060
OCAI01001586
235114
Bacillota
TTT
Lys
>WENV180499943
OCAI01000858
235114
Bacillota
TTT
Lys
>WENV180500163
OCAI01002979
429429
Bacillota
CCA
Trp
>WENV180500041
OCAI01001385
429429
Bacillota
CCA
Trp
>WENV180499829
OCAI01000511
429429
Bacillota
CCA
Trp
>WENV180500138
OCAI01002435
313454
Bacillota
GAA
Phe
>WENV180499688
OCAI01000202
313454
Bacillota
GAA
Phe
>WENV180500019
OCAI01001206
41154
Bacillota
TAA
Leu
>WENV180499819
OCAI01000489
44859
Bacillota
AAG
Leu
>WENV180499818
OCAI01000489
44859
Bacillota
AAG
Leu
>WENV180500220
OCAI01004074
11034
Bacillota
GGA
Ser
>WENV180500029
OCAI01001281
11034
Bacillota
GGA
Ser
>WENV180500028
OCAI01001281
11034
Bacillota
GGA
Ser
>WENV180500255
OCAI01005274
235117
Bacillota
TAC
Val
>WENV180499952
OCAI01000914
235117
Bacillota
TAC
Val
>WENV180500508
OCAI01051720
156937
Bacillota
GTG
His
>WENV180500560
OCAI01096756
235079
Bacillota
GAA
Phe
>WENV180500143
OCAI01002543
235079
Bacillota
GAA
Phe
>WENV180500101
OCAI01001901
235079
Bacillota
GAA
Phe
>WENV180500069
OCAI01001680
235079
Bacillota
GAA
Phe
>WENV180499954
OCAI01000914
235079
Bacillota
GAA
Phe
>WENV180499596
OCAI01000117
235079
Bacillota
GAA
Phe
>WENV180500517
OCAI01056287
235087
Bacillota
TGC
Ala
>WENV180500001
OCAI01001175
149041
Bacillota
GTC
Asp
>WENV180500174
OCAI01003124
316443
Bacillota
GTC
Asp
>WENV180500460
OCAI01033922
338149
Bacillota
CTC
Glu
>WENV180500377
OCAI01015203
338149
Bacillota
CTC
Glu
>WENV180500213
OCAI01003881
338149
Bacillota
CTC
Glu
>WENV180500117
OCAI01002181
338149
Bacillota
CTC
Glu
>WENV180499990
OCAI01001082
338149
Bacillota
CTC
Glu
>WENV180500154
OCAI01002682
245298
Bacillota
CGG
Pro
>WENV180499985
OCAI01001052
245298
Bacillota
CGG
Pro
>WENV180499935
OCAI01000820
37269
Bacillota
TGA
Ser
>WENV180500303
OCAI01007768
287000
Bacillota
GTT
Asn
>WENV180499707
OCAI01000221
169968
Bacillota
CAT
Met
>WENV180499687
OCAI01000202
169968
Bacillota
CAT
Met
>WENV180500128
OCAI01002295
413152
Bacillota
TCC
Gly
>WENV180499855
OCAI01000573
162445
Bacillota
CAT
Met
>WENV180499853
OCAI01000573
162445
Bacillota
CAT
Met
>WENV180500407
OCAI01019477
201704
Bacillota
GAT
Ile
>WENV180500222
OCAI01004114
152492
Bacillota
GGG
Pro
>WENV180499594
OCAI01000117
235078
Bacillota
TAC
Val
>WENV180500198
OCAI01003422
144610
Bacillota
GTG
His
>WENV180500058
OCAI01001586
144610
Bacillota
GTG
His
>WENV180500157
OCAI01002799
411547
Bacillota
CTG
Gln
>WENV180500153
OCAI01002682
411547
Bacillota
CTG
Gln
>WENV180500038
OCAI01001360
411547
Bacillota
CTG
Gln
>WENV180499984
OCAI01001052
411547
Bacillota
CTG
Gln
>WENV180499792
OCAI01000414
411547
Bacillota
CTG
Gln
>WENV180500079
OCAI01001702
4624
Bacillota
GCT
Ser
>WENV180499979
OCAI01001005
4624
Bacillota
GCT
Ser
>WENV180500404
OCAI01018560
313164
Bacillota
TTT
Lys
>WENV180500176
OCAI01003124
109476
Bacillota
TAG
Leu
>WENV180500012
OCAI01001195
235095
Bacillota
GGT
Thr
>WENV180499968
OCAI01000941
235095
Bacillota
GGT
Thr
>WENV180499967
OCAI01000941
235095
Bacillota
GGT
Thr
>WENV180499999
OCAI01001175
239832
Bacillota
TGT
Thr
>WENV180500352
OCAI01012322
411549
Bacillota
TTG
Gln
>WENV180499813
OCAI01000480
411549
Bacillota
TTG
Gln
>WENV180500136
OCAI01002396
235142
Bacillota
CTT
Lys
>WENV180500509
OCAI01051884
148188
Bacillota
CCG
Arg
>WENV180500336
OCAI01010844
148188
Bacillota
CCG
Arg
>WENV180500035
OCAI01001338
148188
Bacillota
CCG
Arg
>WENV180500310
OCAI01008100
80612
Bacillota
GTA
Tyr
>WENV180500246
OCAI01005055
80612
Bacillota
GTA
Tyr
>WENV180499742
OCAI01000281
298620
Bacillota
CAT
Met
>WENV180499944
OCAI01000875
235124
Bacillota
TGG
Pro
>WENV180499808
OCAI01000475
235124
Bacillota
TGG
Pro
>WENV180500311
OCAI01008143
338129
Bacillota
TGT
Thr
>WENV180500245
OCAI01004994
338129
Bacillota
TGT
Thr
>WENV180499963
OCAI01000937
338129
Bacillota
TGT
Thr
>WENV180500127
OCAI01002293
144583
Bacillota
ACG
Arg
>WENV180499993
OCAI01001101
144583
Bacillota
ACG
Arg
>WENV180500420
OCAI01023144
320668
Bacillota
CTT
Lys
>WENV180500402
OCAI01018560
144672
Bacillota
TCT
Arg
>WENV180500241
OCAI01004967
144652
Bacillota
GTC
Asp
>WENV180500531
OCAI01076289
247734
Bacillota
TGC
Ala
>WENV180500010
OCAI01001195
235171
Bacillota
CCA
Trp
>WENV180500461
OCAI01033922
144621
Bacillota
GTT
Asn
>WENV180500398
OCAI01017518
144621
Bacillota
GTT
Asn
>WENV180500118
OCAI01002181
144621
Bacillota
GTT
Asn
>WENV180499991
OCAI01001082
144621
Bacillota
GTT
Asn
>WENV180499976
OCAI01000988
144621
Bacillota
GTT
Asn
>WENV180499942
OCAI01000858
235113
Bacillota
GAA
Phe
>WENV180499830
OCAI01000513
235113
Bacillota
GAA
Phe
>WENV180500561
OCAI01096972
58712
Bacillota
CAG
Leu
>WENV180500162
OCAI01002885
58712
Bacillota
CAG
Leu
>WENV180500155
OCAI01002761
58712
Bacillota
CAG
Leu
>WENV180500099
OCAI01001890
58712
Bacillota
CAG
Leu
>WENV180500199
OCAI01003498
245296
Bacillota
CCC
Gly
>WENV180500378
OCAI01015203
272992
Bacillota
CTT
Lys
>WENV180500307
OCAI01007941
272992
Bacillota
CTT
Lys
>WENV180500214
OCAI01003881
272992
Bacillota
CTT
Lys
>WENV180500197
OCAI01003422
157635
Bacillota
TCT
Arg
>WENV180500050
OCAI01001514
144594
Bacillota
CAC
Val
>WENV180499900
OCAI01000698
144594
Bacillota
CAC
Val
>WENV180499873
OCAI01000614
95563
Bacillota
GTA
Tyr
>WENV180499730
OCAI01000266
338127
Bacillota
TTG
Gln
>WENV180500111
OCAI01002079
338128
Bacillota
TTC
Glu
>WENV180499973
OCAI01000956
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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