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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
112 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180570209
OCLS01000011
6892
Bacillota
CGA
Ser
>WENV180570489
OCLS01000163
235908
Bacillota
GGT
Thr
>WENV180570148
OCLS01000002
37090
Bacillota
TAA
Leu
>WENV180570507
OCLS01000178
37110
Bacillota
TAA
Leu
>WENV180570510
OCLS01000178
37110
Bacillota
TAA
Leu
>WENV180570388
OCLS01000080
95695
Bacillota
GTA
Tyr
>WENV180570392
OCLS01000080
95695
Bacillota
GTA
Tyr
>WENV180570584
OCLS01000272
338227
Bacillota
CCT
Arg
>WENV180570827
OCLS01000679
338544
Bacillota
TGT
Thr
>WENV180570561
OCLS01000249
338544
Bacillota
TGT
Thr
>WENV180570391
OCLS01000080
338544
Bacillota
TGT
Thr
>WENV180570374
OCLS01000070
235535
Bacillota
>WENV180570923
OCLS01001219
106079
Bacillota
TAG
Leu
>WENV180570502
OCLS01000173
411591
Bacillota
GGT
Thr
>WENV180570231
OCLS01000016
277175
Bacillota
CTT
Lys
>WENV180570230
OCLS01000016
277175
Bacillota
CTT
Lys
>WENV180570927
OCLS01001219
147639
Bacillota
ACG
Arg
>WENV180570175
OCLS01000005
413601
Bacillota
GCA
Cys
>WENV180571061
OCLS01002822
235903
Bacillota
TTT
Lys
>WENV180570872
OCLS01000895
235903
Bacillota
TTT
Lys
>WENV180570435
OCLS01000111
235903
Bacillota
TTT
Lys
>WENV180570664
OCLS01000367
23437
Bacillota
GGA
Ser
>WENV180570139
OCLS01000002
20559
Bacillota
GCT
Ser
>WENV180570506
OCLS01000178
338552
Bacillota
ACG
Arg
>WENV180570917
OCLS01001099
235902
Bacillota
CTT
Lys
>WENV180571060
OCLS01002822
338557
Bacillota
TTG
Gln
>WENV180570871
OCLS01000895
338557
Bacillota
TTG
Gln
>WENV180570434
OCLS01000111
338557
Bacillota
TTG
Gln
>WENV180570224
OCLS01000014
235534
Bacillota
GAC
Val
>WENV180570732
OCLS01000464
116350
Bacillota
TAG
Leu
>WENV180570826
OCLS01000679
186380
Bacillota
GTC
Asp
>WENV180570564
OCLS01000249
186380
Bacillota
GTC
Asp
>WENV180570560
OCLS01000249
186380
Bacillota
GTC
Asp
>WENV180570390
OCLS01000080
186380
Bacillota
GTC
Asp
>WENV180570376
OCLS01000074
58829
Bacillota
CAA
Leu
>WENV180570177
OCLS01000005
58766
Bacillota
GAG
Leu
>WENV180570152
OCLS01000002
145264
Bacillota
CAT
Met
>WENV180570863
OCLS01000854
96360
Bacillota
GTA
Tyr
>WENV180570358
OCLS01000055
96360
Bacillota
GTA
Tyr
>WENV180570173
OCLS01000005
338342
Bacillota
TTG
Gln
>WENV180570149
OCLS01000002
144988
Bacillota
ACG
Arg
>WENV180570997
OCLS01001354
173314
Bacillota
GAT
Ile
>WENV180570180
OCLS01000005
113622
Bacillota
GTA
Tyr
>WENV180570170
OCLS01000005
113622
Bacillota
GTA
Tyr
>WENV180570154
OCLS01000002
6891
Bacillota
>WENV180570663
OCLS01000367
338555
Bacillota
CCT
Arg
>WENV180570487
OCLS01000163
243345
Bacillota
GAA
Phe
>WENV180570469
OCLS01000138
243345
Bacillota
GAA
Phe
>WENV180570162
OCLS01000002
16256
Bacillota
GCT
Ser
>WENV180570472
OCLS01000143
95696
Bacillota
TAG
Leu
>WENV180570421
OCLS01000097
238745
Bacillota
CTT
Lys
>WENV180570847
OCLS01000737
145385
Bacillota
TCG
Arg
>WENV180570869
OCLS01000873
367412
Bacillota
GTT
Asn
>WENV180570836
OCLS01000692
367412
Bacillota
GTT
Asn
>WENV180570835
OCLS01000692
367412
Bacillota
GTT
Asn
>WENV180570526
OCLS01000207
367412
Bacillota
GTT
Asn
>WENV180570387
OCLS01000080
367412
Bacillota
GTT
Asn
>WENV180570385
OCLS01000079
10779
Bacillota
CGA
Ser
>WENV180571017
OCLS01001517
47370
Bacillota
TAA
Leu
>WENV180570284
OCLS01000028
340986
Bacillota
CCT
Arg
>WENV180570499
OCLS01000172
116671
Bacillota
GTA
Tyr
>WENV180570585
OCLS01000276
41203
Bacillota
AAG
Leu
>WENV180570544
OCLS01000227
41203
Bacillota
AAG
Leu
>WENV180570845
OCLS01000737
338558
Bacillota
GCC
Gly
>WENV180570860
OCLS01000854
339391
Bacillota
TTC
Glu
>WENV180570482
OCLS01000156
339391
Bacillota
TTC
Glu
>WENV180570182
OCLS01000005
235530
Bacillota
TTT
Lys
>WENV180570145
OCLS01000002
235530
Bacillota
TTT
Lys
>WENV180571043
OCLS01001902
10568
Bacillota
GGA
Ser
>WENV180570984
OCLS01001334
411739
Bacillota
TCC
Gly
>WENV180570846
OCLS01000737
411739
Bacillota
TCC
Gly
>WENV180570695
OCLS01000419
411739
Bacillota
TCC
Gly
>WENV180570431
OCLS01000111
411739
Bacillota
TCC
Gly
>WENV180570181
OCLS01000005
338345
Bacillota
TTG
Gln
>WENV180570994
OCLS01001345
235506
Bacillota
TGC
Ala
>WENV180570144
OCLS01000002
235529
Bacillota
TGT
Thr
>WENV180570986
OCLS01001334
279635
Bacillota
GTG
His
>WENV180570870
OCLS01000895
279635
Bacillota
GTG
His
>WENV180570433
OCLS01000111
279635
Bacillota
GTG
His
>WENV180570512
OCLS01000182
338344
Bacillota
CCT
Arg
>WENV180570373
OCLS01000070
235533
Bacillota
GTT
Asn
>WENV180570161
OCLS01000002
235533
Bacillota
GTT
Asn
>WENV180570138
OCLS01000002
235533
Bacillota
GTT
Asn
>WENV180570476
OCLS01000149
144795
Bacillota
GTT
Asn
>WENV180571069
OCLS01003412
17822
Bacillota
TGA
Ser
>WENV180570898
OCLS01001012
17822
Bacillota
TGA
Ser
>WENV180570600
OCLS01000296
16270
Bacillota
>WENV180570501
OCLS01000172
338225
Bacillota
CCG
Arg
>WENV180570985
OCLS01001334
145383
Bacillota
TCT
Arg
>WENV180570982
OCLS01001334
145383
Bacillota
TCT
Arg
>WENV180570432
OCLS01000111
145383
Bacillota
TCT
Arg
>WENV180570678
OCLS01000387
338553
Bacillota
CTC
Glu
>WENV180570844
OCLS01000737
95697
Bacillota
TAG
Leu
>WENV180570828
OCLS01000679
338545
Bacillota
>WENV180570562
OCLS01000249
338545
Bacillota
>WENV180570558
OCLS01000249
338545
Bacillota
>WENV180570174
OCLS01000005
338343
Bacillota
GCC
Gly
>WENV180570159
OCLS01000002
411647
Bacillota
TCC
Gly
>WENV180570142
OCLS01000002
411647
Bacillota
TCC
Gly
>WENV180570169
OCLS01000005
235532
Bacillota
GAA
Phe
>WENV180570157
OCLS01000002
235532
Bacillota
GAA
Phe
>WENV180570473
OCLS01000143
338556
Bacillota
CCC
Gly
>WENV180570384
OCLS01000079
81208
Bacillota
CAG
Leu
>WENV180570563
OCLS01000249
294589
Bacillota
TAC
Val
>WENV180570559
OCLS01000249
294589
Bacillota
TAC
Val
>WENV180570389
OCLS01000080
294589
Bacillota
TAC
Val
>WENV180570324
OCLS01000044
80673
Bacillota
GAG
Leu
>WENV180570514
OCLS01000186
44932
Bacillota
>WENV180571064
OCLS01002873
7065
Bacillota
GCT
Ser
>WENV180570172
OCLS01000005
235528
Bacillota
GTG
His
>WENV180570158
OCLS01000002
235528
Bacillota
GTG
His
>WENV180570505
OCLS01000178
17824
Bacillota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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