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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181010617
ODWH01106600
412480
Bacteroidota
>WENV181010501
ODWH01029014
339412
Bacteroidota
GGT
Thr
>WENV181010401
ODWH01006412
97610
Bacteroidota
GTA
Tyr
>WENV181010595
ODWH01082100
47461
Bacteroidota
TGA
Ser
>WENV181010579
ODWH01074147
246808
Bacteroidota
CTT
Lys
>WENV181010438
ODWH01012837
99288
Bacteroidota
TAG
Leu
>WENV181010528
ODWH01038486
258903
Bacteroidota
>WENV181010561
ODWH01061195
344824
Bacteroidota
CCG
Arg
>WENV181010616
ODWH01106029
237797
Bacteroidota
CCA
Trp
>WENV181010553
ODWH01058371
413952
Bacteroidota
>WENV181010539
ODWH01047465
412479
Bacteroidota
TTG
Gln
>WENV181010391
ODWH01005460
188343
Bacteroidota
TGC
Ala
>WENV181010606
ODWH01091890
155123
Bacteroidota
GTT
Asn
>WENV181010382
ODWH01004362
17035
Bacteroidota
GGA
Ser
>WENV181010400
ODWH01006412
145504
Bacteroidota
TGT
Thr
>WENV181010541
ODWH01048890
191087
Bacteroidota
TCT
Arg
>WENV181010559
ODWH01059623
155147
Bacteroidota
GGC
Ala
>WENV181010492
ODWH01026400
414526
Bacteroidota
GCA
Cys
>WENV181010525
ODWH01037503
81773
Bacteroidota
CAG
Leu
>WENV181010518
ODWH01034803
16898
Bacteroidota
GGA
Ser
>WENV181010354
ODWH01001290
148247
Bacteroidota
TGC
Ala
>WENV181010586
ODWH01077379
344769
Bacteroidota
CTC
Glu
>WENV181010349
ODWH01001083
145310
Bacteroidota
TGC
Ala
>WENV181010377
ODWH01003690
144639
Bacteroidota
GGC
Ala
>WENV181010609
ODWH01097436
280469
Bacteroidota
CGT
Thr
>WENV181010462
ODWH01019808
244299
Bacteroidota
CGG
Pro
>WENV181010624
ODWH01114177
127951
Bacteroidota
TAC
Val
>WENV181010578
ODWH01074105
246641
Bacteroidota
GAA
Phe
>WENV181010356
ODWH01001330
147945
Bacteroidota
CAT
Met
>WENV181010477
ODWH01022433
159335
Bacteroidota
GTT
Asn
>WENV181010580
ODWH01074147
242581
Bacteroidota
TTT
Lys
>WENV181010604
ODWH01090341
59498
Bacteroidota
GAG
Leu
>WENV181010424
ODWH01008218
59498
Bacteroidota
GAG
Leu
>WENV181010454
ODWH01018103
414472
Bacteroidota
TTG
Gln
>WENV181010427
ODWH01008547
154850
Bacteroidota
CAT
Met
>WENV181010448
ODWH01017336
235129
Bacteroidota
GCC
Gly
>WENV181010388
ODWH01005079
345164
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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