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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181134585
OEGF01225661
196621
Bacillota
GTC
Asp
>WENV181134054
OEGF01016188
155958
Bacillota
GAT
Ile
>WENV181133949
OEGF01008159
155113
Bacillota
CGG
Pro
>WENV181134023
OEGF01013422
144612
Bacillota
TCT
Arg
>WENV181134438
OEGF01110038
156189
Bacillota
GAT
Ile
>WENV181134033
OEGF01014148
235098
Bacillota
GAC
Val
>WENV181134144
OEGF01026515
44854
Bacillota
TGA
Ser
>WENV181134095
OEGF01021076
44854
Bacillota
TGA
Ser
>WENV181134296
OEGF01056343
144577
Bacillota
GAT
Ile
>WENV181134216
OEGF01038223
304022
Bacillota
GCC
Gly
>WENV181133820
OEGF01003929
59312
Bacillota
CAG
Leu
>WENV181134279
OEGF01051262
235150
Bacillota
TGC
Ala
>WENV181134285
OEGF01053479
281701
Bacillota
TGC
Ala
>WENV181134202
OEGF01035053
11034
Bacillota
GGA
Ser
>WENV181134584
OEGF01225661
235117
Bacillota
TAC
Val
>WENV181134091
OEGF01020592
235079
Bacillota
GAA
Phe
>WENV181134295
OEGF01056343
235087
Bacillota
TGC
Ala
>WENV181134010
OEGF01012053
173314
Bacillota
GAT
Ile
>WENV181134417
OEGF01099422
338149
Bacillota
CTC
Glu
>WENV181134340
OEGF01071298
245298
Bacillota
CGG
Pro
>WENV181134554
OEGF01204781
155089
Bacillota
CAT
Met
>WENV181133768
OEGF01002932
413152
Bacillota
TCC
Gly
>WENV181134255
OEGF01046857
100326
Bacillota
GTA
Tyr
>WENV181134341
OEGF01071396
411547
Bacillota
CTG
Gln
>WENV181134503
OEGF01147628
4624
Bacillota
GCT
Ser
>WENV181134167
OEGF01029217
235095
Bacillota
GGT
Thr
>WENV181134250
OEGF01046171
253195
Bacillota
TTT
Lys
>WENV181133986
OEGF01010307
312428
Bacillota
TAC
Val
>WENV181134134
OEGF01025618
411549
Bacillota
TTG
Gln
>WENV181134297
OEGF01057524
148188
Bacillota
CCG
Arg
>WENV181134597
OEGF01226735
80612
Bacillota
GTA
Tyr
>WENV181133718
OEGF01002066
243401
Bacillota
CGT
Thr
>WENV181134215
OEGF01038112
235124
Bacillota
TGG
Pro
>WENV181134187
OEGF01032388
157838
Bacillota
GTC
Asp
>WENV181134497
OEGF01145125
144583
Bacillota
ACG
Arg
>WENV181134257
OEGF01046857
238974
Bacillota
GAA
Phe
>WENV181134418
OEGF01099422
144621
Bacillota
GTT
Asn
>WENV181134344
OEGF01071583
58712
Bacillota
CAG
Leu
>WENV181134346
OEGF01072235
245296
Bacillota
CCC
Gly
>WENV181134224
OEGF01039617
272992
Bacillota
CTT
Lys
>WENV181133702
OEGF01001903
178024
Bacillota
TCT
Arg
>WENV181134009
OEGF01012053
299139
Bacillota
TGC
Ala
>WENV181134101
OEGF01021892
144594
Bacillota
CAC
Val
>WENV181134401
OEGF01092122
338127
Bacillota
TTG
Gln
>WENV181134220
OEGF01038758
272488
Bacillota
GAA
Phe
>WENV181134290
OEGF01055282
292012
Bacillota
TGC
Ala
>WENV181133836
OEGF01004247
413179
Bacillota
CCC
Gly
>WENV181134272
OEGF01050343
389329
Bacillota
TTC
Glu
>WENV181134471
OEGF01126640
338128
Bacillota
TTC
Glu
>WENV181133893
OEGF01005819
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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