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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
42 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181137168
OEGJ01000552
243647
Bacillota
TTT
Lys
>WENV181137700
OEGJ01015625
243647
Bacillota
TTT
Lys
>WENV181137073
OEGJ01000196
16842
Bacillota
CGA
Ser
>WENV181138133
OEGJ01124858
37213
Bacillota
TGA
Ser
>WENV181138142
OEGJ01132006
342730
Bacillota
CTC
Glu
>WENV181137950
OEGJ01051850
243099
Bacillota
GTT
Asn
>WENV181137823
OEGJ01032107
307003
Bacillota
TGC
Ala
>WENV181137997
OEGJ01068040
235137
Bacillota
TGC
Ala
>WENV181138094
OEGJ01101158
308424
Bacillota
TTT
Lys
>WENV181137417
OEGJ01003363
16834
Bacillota
GCT
Ser
>WENV181137068
OEGJ01000158
114002
Bacillota
CAA
Leu
>WENV181137000
OEGJ01000006
37437
Bacillota
TAA
Leu
>WENV181138035
OEGJ01082008
162028
Bacillota
ACG
Arg
>WENV181138092
OEGJ01101158
113951
Bacillota
GTA
Tyr
>WENV181137702
OEGJ01015625
243612
Bacillota
TAC
Val
>WENV181137387
OEGJ01002595
199366
Bacillota
CAT
Met
>WENV181137989
OEGJ01064404
81382
Bacillota
GAG
Leu
>WENV181138234
OEGJ01184825
338676
Bacillota
CCG
Arg
>WENV181137675
OEGJ01012836
338676
Bacillota
CCG
Arg
>WENV181137076
OEGJ01000215
147135
Bacillota
ACG
Arg
>WENV181137055
OEGJ01000101
342895
Bacillota
CAT
Met
>WENV181137610
OEGJ01009194
190275
Bacillota
TCT
Arg
>WENV181137251
OEGJ01001157
194150
Bacillota
TGG
Pro
>WENV181137824
OEGJ01032107
152019
Bacillota
GAT
Ile
>WENV181137036
OEGJ01000058
235197
Bacillota
GTC
Asp
>WENV181136996
OEGJ01000006
235197
Bacillota
GTC
Asp
>WENV181137317
OEGJ01001745
368876
Bacillota
GCC
Gly
>WENV181136998
OEGJ01000006
368876
Bacillota
GCC
Gly
>WENV181137388
OEGJ01002595
241526
Bacillota
CTT
Lys
>WENV181137166
OEGJ01000552
243613
Bacillota
GTG
His
>WENV181137227
OEGJ01000857
152491
Bacillota
CAT
Met
>WENV181137386
OEGJ01002595
243098
Bacillota
GGT
Thr
>WENV181137546
OEGJ01006444
241638
Bacillota
GTG
His
>WENV181137223
OEGJ01000857
273029
Bacillota
TGT
Thr
>WENV181137226
OEGJ01000857
281472
Bacillota
GGT
Thr
>WENV181137253
OEGJ01001157
178024
Bacillota
TCT
Arg
>WENV181137452
OEGJ01004162
413657
Bacillota
CCC
Gly
>WENV181137735
OEGJ01018054
152018
Bacillota
CCT
Arg
>WENV181138090
OEGJ01101041
81598
Bacillota
CAG
Leu
>WENV181137978
OEGJ01061782
384950
Bacillota
GCC
Gly
>WENV181137699
OEGJ01015625
287034
Bacillota
GTT
Asn
>WENV181137167
OEGJ01000552
343027
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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