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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181157328
OEIG01002240
412480
Bacteroidota
>WENV181157437
OEIG01005071
95987
Bacteroidota
CAA
Leu
>WENV181156954
OEIG01000021
339412
Bacteroidota
GGT
Thr
>WENV181156958
OEIG01000022
339412
Bacteroidota
GGT
Thr
>WENV181157096
OEIG01000400
339412
Bacteroidota
GGT
Thr
>WENV181157185
OEIG01000728
148097
Bacteroidota
TGG
Pro
>WENV181157431
OEIG01004422
237796
Bacteroidota
CGT
Thr
>WENV181157968
OEIG01068960
237796
Bacteroidota
CGT
Thr
>WENV181158017
OEIG01092207
97610
Bacteroidota
GTA
Tyr
>WENV181157187
OEIG01000728
97336
Bacteroidota
CAG
Leu
>WENV181157154
OEIG01000569
340120
Bacteroidota
CCT
Arg
>WENV181157412
OEIG01004031
24174
Bacteroidota
GCT
Ser
>WENV181156962
OEIG01000029
24174
Bacteroidota
GCT
Ser
>WENV181157514
OEIG01008971
340029
Bacteroidota
TTC
Glu
>WENV181157450
OEIG01006063
413663
Bacteroidota
CTG
Gln
>WENV181157771
OEIG01031668
136244
Bacteroidota
TAC
Val
>WENV181157632
OEIG01017886
136244
Bacteroidota
TAC
Val
>WENV181157541
OEIG01010332
136244
Bacteroidota
TAC
Val
>WENV181157285
OEIG01001490
136244
Bacteroidota
TAC
Val
>WENV181157001
OEIG01000066
136244
Bacteroidota
TAC
Val
>WENV181157097
OEIG01000400
237797
Bacteroidota
CCA
Trp
>WENV181157012
OEIG01000087
148096
Bacteroidota
GTG
His
>WENV181157037
OEIG01000175
413952
Bacteroidota
>WENV181157444
OEIG01005903
238811
Bacteroidota
CAT
Met
>WENV181157035
OEIG01000173
238811
Bacteroidota
CAT
Met
>WENV181157411
OEIG01004001
412479
Bacteroidota
TTG
Gln
>WENV181157651
OEIG01018849
155123
Bacteroidota
GTT
Asn
>WENV181157448
OEIG01005996
155123
Bacteroidota
GTT
Asn
>WENV181157212
OEIG01000884
155123
Bacteroidota
GTT
Asn
>WENV181156992
OEIG01000050
155123
Bacteroidota
GTT
Asn
>WENV181157399
OEIG01003637
412439
Bacteroidota
CCA
Trp
>WENV181157534
OEIG01010109
238810
Bacteroidota
CGG
Pro
>WENV181157428
OEIG01004236
127253
Bacteroidota
GGG
Pro
>WENV181158035
OEIG01101026
238671
Bacteroidota
TTT
Lys
>WENV181157914
OEIG01051934
37076
Bacteroidota
TAA
Leu
>WENV181157473
OEIG01007050
147939
Bacteroidota
CAT
Met
>WENV181157020
OEIG01000127
339634
Bacteroidota
CCT
Arg
>WENV181158130
OEIG01165933
136207
Bacteroidota
TAC
Val
>WENV181157512
OEIG01008957
136207
Bacteroidota
TAC
Val
>WENV181157388
OEIG01003137
136207
Bacteroidota
TAC
Val
>WENV181157041
OEIG01000180
136207
Bacteroidota
TAC
Val
>WENV181157446
OEIG01005954
130479
Bacteroidota
TAC
Val
>WENV181158138
OEIG01169434
171336
Bacteroidota
GGC
Ala
>WENV181157217
OEIG01000888
81773
Bacteroidota
CAG
Leu
>WENV181157522
OEIG01009302
96147
Bacteroidota
TAG
Leu
>WENV181157032
OEIG01000166
16898
Bacteroidota
GGA
Ser
>WENV181157665
OEIG01019464
148247
Bacteroidota
TGC
Ala
>WENV181157251
OEIG01001227
412235
Bacteroidota
>WENV181157848
OEIG01038550
344769
Bacteroidota
CTC
Glu
>WENV181156961
OEIG01000028
339996
Bacteroidota
TTC
Glu
>WENV181157298
OEIG01001704
147148
Bacteroidota
CAT
Met
>WENV181157092
OEIG01000395
147148
Bacteroidota
CAT
Met
>WENV181157657
OEIG01019024
175704
Bacteroidota
TGC
Ala
>WENV181157394
OEIG01003462
59182
Bacteroidota
GAG
Leu
>WENV181157051
OEIG01000219
59182
Bacteroidota
GAG
Leu
>WENV181157063
OEIG01000258
144639
Bacteroidota
GGC
Ala
>WENV181157310
OEIG01001859
151121
Bacteroidota
CAT
Met
>WENV181157396
OEIG01003498
240012
Bacteroidota
CCC
Gly
>WENV181157955
OEIG01063729
251411
Bacteroidota
GAA
Phe
>WENV181157002
OEIG01000067
244299
Bacteroidota
CGG
Pro
>WENV181157142
OEIG01000480
127951
Bacteroidota
TAC
Val
>WENV181157141
OEIG01000480
127951
Bacteroidota
TAC
Val
>WENV181157286
OEIG01001490
95986
Bacteroidota
GTA
Tyr
>WENV181157095
OEIG01000400
95986
Bacteroidota
GTA
Tyr
>WENV181157004
OEIG01000068
95986
Bacteroidota
GTA
Tyr
>WENV181156957
OEIG01000022
95986
Bacteroidota
GTA
Tyr
>WENV181157453
OEIG01006220
16494
Bacteroidota
GGA
Ser
>WENV181158155
OEIG01182390
196394
Bacteroidota
GTC
Asp
>WENV181157586
OEIG01013023
196394
Bacteroidota
GTC
Asp
>WENV181157696
OEIG01021557
147945
Bacteroidota
CAT
Met
>WENV181157815
OEIG01034933
412236
Bacteroidota
CCC
Gly
>WENV181157432
OEIG01004422
412236
Bacteroidota
CCC
Gly
>WENV181157447
OEIG01005954
133943
Bacteroidota
TAC
Val
>WENV181157163
OEIG01000619
96124
Bacteroidota
TAG
Leu
>WENV181157197
OEIG01000762
59498
Bacteroidota
GAG
Leu
>WENV181157188
OEIG01000728
59498
Bacteroidota
GAG
Leu
>WENV181157064
OEIG01000265
59498
Bacteroidota
GAG
Leu
>WENV181157209
OEIG01000832
302002
Bacteroidota
CGT
Thr
>WENV181157033
OEIG01000168
127023
Bacteroidota
GGG
Pro
>WENV181157316
OEIG01001911
235129
Bacteroidota
GCC
Gly
>WENV181158121
OEIG01152329
155341
Bacteroidota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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