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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
85 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181219794
OFCP01000875
235146
Actinomycetota
CGT
Thr
>WENV181219729
OFCP01000454
235347
Actinomycetota
GGC
Ala
>WENV181219730
OFCP01000454
235347
Actinomycetota
GGC
Ala
>WENV181219511
OFCP01000038
16400
Actinomycetota
GAG
Leu
>WENV181219510
OFCP01000037
37070
Actinomycetota
CGA
Ser
>WENV181219547
OFCP01000075
201717
Actinomycetota
CTT
Lys
>WENV181219637
OFCP01000210
201717
Actinomycetota
CTT
Lys
>WENV181219731
OFCP01000454
144600
Actinomycetota
TGG
Pro
>WENV181219603
OFCP01000157
235194
Actinomycetota
GTG
His
>WENV181219792
OFCP01000875
273786
Actinomycetota
CGT
Thr
>WENV181219739
OFCP01000482
158720
Actinomycetota
ACG
Arg
>WENV181219738
OFCP01000482
158720
Actinomycetota
ACG
Arg
>WENV181219654
OFCP01000244
305322
Actinomycetota
TGC
Ala
>WENV181219560
OFCP01000086
411601
Actinomycetota
CCC
Gly
>WENV181219676
OFCP01000290
144826
Actinomycetota
GGG
Pro
>WENV181219572
OFCP01000105
144826
Actinomycetota
GGG
Pro
>WENV181219593
OFCP01000141
23370
Actinomycetota
GCT
Ser
>WENV181219671
OFCP01000281
338239
Actinomycetota
TTC
Glu
>WENV181219466
OFCP01000013
338239
Actinomycetota
TTC
Glu
>WENV181219570
OFCP01000102
235174
Actinomycetota
TGC
Ala
>WENV181219568
OFCP01000101
235101
Actinomycetota
TTT
Lys
>WENV181219514
OFCP01000041
121510
Actinomycetota
TAA
Leu
>WENV181219536
OFCP01000064
356045
Actinomycetota
GAC
Val
>WENV181219899
OFCP01003095
44855
Actinomycetota
TGA
Ser
>WENV181219470
OFCP01000015
145345
Actinomycetota
TAC
Val
>WENV181219537
OFCP01000064
235199
Actinomycetota
CAC
Val
>WENV181219846
OFCP01001615
44862
Actinomycetota
CGA
Ser
>WENV181219452
OFCP01000005
198659
Actinomycetota
TAC
Val
>WENV181219803
OFCP01000954
413665
Actinomycetota
TTG
Gln
>WENV181219530
OFCP01000055
413665
Actinomycetota
TTG
Gln
>WENV181219534
OFCP01000064
254857
Actinomycetota
CCG
Arg
>WENV181219488
OFCP01000021
254857
Actinomycetota
CCG
Arg
>WENV181219633
OFCP01000195
113703
Actinomycetota
TAG
Leu
>WENV181219592
OFCP01000141
144700
Actinomycetota
CAT
Met
>WENV181219505
OFCP01000037
44942
Actinomycetota
TGA
Ser
>WENV181219498
OFCP01000033
45147
Actinomycetota
CGA
Ser
>WENV181219834
OFCP01001377
295695
Actinomycetota
CTC
Glu
>WENV181219578
OFCP01000124
295695
Actinomycetota
CTC
Glu
>WENV181219474
OFCP01000018
295695
Actinomycetota
CTC
Glu
>WENV181219565
OFCP01000090
98279
Actinomycetota
GTA
Tyr
>WENV181219835
OFCP01001377
338148
Actinomycetota
CTG
Gln
>WENV181219579
OFCP01000124
338148
Actinomycetota
CTG
Gln
>WENV181219475
OFCP01000018
338148
Actinomycetota
CTG
Gln
>WENV181219686
OFCP01000321
235148
Actinomycetota
GTT
Asn
>WENV181219461
OFCP01000008
235148
Actinomycetota
GTT
Asn
>WENV181219460
OFCP01000008
235148
Actinomycetota
GTT
Asn
>WENV181219706
OFCP01000400
53078
Actinomycetota
GGA
Ser
>WENV181219577
OFCP01000124
53078
Actinomycetota
GGA
Ser
>WENV181219480
OFCP01000019
237792
Actinomycetota
CCT
Arg
>WENV181219639
OFCP01000220
113702
Actinomycetota
TAA
Leu
>WENV181219608
OFCP01000165
176456
Actinomycetota
TCT
Arg
>WENV181219695
OFCP01000369
144825
Actinomycetota
CAT
Met
>WENV181219601
OFCP01000154
145347
Actinomycetota
CAA
Leu
>WENV181219737
OFCP01000479
235348
Actinomycetota
CCT
Arg
>WENV181219580
OFCP01000124
237794
Actinomycetota
CCG
Arg
>WENV181219567
OFCP01000090
16467
Actinomycetota
GCT
Ser
>WENV181219526
OFCP01000050
411554
Actinomycetota
CCC
Gly
>WENV181219793
OFCP01000875
113601
Actinomycetota
TAG
Leu
>WENV181219477
OFCP01000018
113601
Actinomycetota
TAG
Leu
>WENV181219640
OFCP01000220
144595
Actinomycetota
CAA
Leu
>WENV181219515
OFCP01000041
144595
Actinomycetota
CAA
Leu
>WENV181219636
OFCP01000207
145343
Actinomycetota
GGG
Pro
>WENV181219453
OFCP01000005
235149
Actinomycetota
CCT
Arg
>WENV181219499
OFCP01000033
51286
Actinomycetota
TGA
Ser
>WENV181219665
OFCP01000262
145269
Actinomycetota
CAT
Met
>WENV181219476
OFCP01000018
235121
Actinomycetota
CGT
Thr
>WENV181219632
OFCP01000195
235121
Actinomycetota
CGT
Thr
>WENV181219459
OFCP01000008
144635
Actinomycetota
TGG
Pro
>WENV181219600
OFCP01000154
119485
Actinomycetota
TAA
Leu
>WENV181219557
OFCP01000084
17009
Actinomycetota
GAG
Leu
>WENV181219727
OFCP01000451
80622
Actinomycetota
CAG
Leu
>WENV181219559
OFCP01000086
80622
Actinomycetota
CAG
Leu
>WENV181219527
OFCP01000050
80622
Actinomycetota
CAG
Leu
>WENV181219469
OFCP01000013
163948
Actinomycetota
CAT
Met
>WENV181219685
OFCP01000321
235173
Actinomycetota
GGC
Ala
>WENV181219571
OFCP01000102
235173
Actinomycetota
GGC
Ala
>WENV181219529
OFCP01000055
235173
Actinomycetota
GGC
Ala
>WENV181219531
OFCP01000055
243162
Actinomycetota
GTT
Asn
>WENV181219596
OFCP01000145
144660
Actinomycetota
TAC
Val
>WENV181219583
OFCP01000127
278447
Actinomycetota
GTG
His
>WENV181219869
OFCP01002158
267574
Actinomycetota
CAC
Val
>WENV181219591
OFCP01000141
95593
Actinomycetota
>WENV181219543
OFCP01000067
95593
Actinomycetota
>WENV181219604
OFCP01000157
144823
Actinomycetota
TCT
Arg
>WENV181219584
OFCP01000129
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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