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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Identical Sequence Group
Mine drainage metagenome Contig1
[ 100 % ]
Number of tRNA clusters
T
C
A
G
T
phe
AAA
0
Ser
AGA
0
Tyr
ATA
0
Cys
ACA
0
T
GAA
5
GGA
4
GTA
5
GCA
10
C
Leu
TAA
7
TGA
7
ochre
TTA
0
opal Sec
TCA
0
A
CAA
8
CGA
6
amber
CTA
0
Trp
CCA
6
G
C
Leu
AAG
0
Pro
AGG
0
His
ATG
0
Arg
ACG
4
T
GAG
4
GGG
5
GTG
10
GCG
5
C
TAG
8
TGG
4
Gln
TTG
10
TCG
5
A
CAG
7
CGG
5
CTG
5
CCG
6
G
A
Ile
AAT
0
Thr
AGT
0
Asn
ATT
0
Ser
ACT
0
T
GAT
11
GGT
3
GTT
6
GCT
5
C
TAT
1
TGT
7
Lys
TTT
7
Arg
TCT
4
A
Met
CAT
20
CGT
6
CTT
8
CCT
5
G
G
Val
AAC
0
Ala
AGC
0
Asp
ATC
0
Gly
ACC
0
T
GAC
9
GGC
5
GTC
4
GCC
8
C
TAC
5
TGC
9
Glu
TTC
1
TCC
1
A
CAC
11
CGC
4
CTC
4
CCC
3
G
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