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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730370
PJTS01000001
412798
Alphaproteobacteria
CTG
Gln
>WENV183731377
PJTS01047208
268154
Alphaproteobacteria
TGT
Thr
>WENV183731042
PJTS01004901
251191
Alphaproteobacteria
TAC
Val
>WENV183730527
PJTS01000093
29895
Alphaproteobacteria
TGA
Ser
>WENV183730903
PJTS01001896
146819
Alphaproteobacteria
TTT
Lys
>WENV183730420
PJTS01000012
58865
Alphaproteobacteria
GAG
Leu
>WENV183730386
PJTS01000003
237489
Alphaproteobacteria
CAT
Met
>WENV183730709
PJTS01000373
193550
Alphaproteobacteria
TCT
Arg
>WENV183730449
PJTS01000024
147152
Alphaproteobacteria
ACG
Arg
>WENV183730448
PJTS01000024
147152
Alphaproteobacteria
ACG
Arg
>WENV183730485
PJTS01000053
191197
Alphaproteobacteria
CCG
Arg
>WENV183730486
PJTS01000054
375044
Alphaproteobacteria
GCC
Gly
>WENV183730368
PJTS01000001
375044
Alphaproteobacteria
GCC
Gly
>WENV183730997
PJTS01003563
23605
Alphaproteobacteria
CGA
Ser
>WENV183730978
PJTS01002986
339325
Alphaproteobacteria
CAC
Val
>WENV183731018
PJTS01003750
282595
Alphaproteobacteria
CCA
Trp
>WENV183730998
PJTS01003566
195945
Alphaproteobacteria
GAT
Ile
>WENV183730510
PJTS01000080
146683
Alphaproteobacteria
GTG
His
>WENV183730405
PJTS01000005
237867
Alphaproteobacteria
TTT
Lys
>WENV183730375
PJTS01000001
256971
Alphaproteobacteria
TGT
Thr
>WENV183730958
PJTS01002697
23561
Alphaproteobacteria
GGA
Ser
>WENV183730537
PJTS01000112
368245
Alphaproteobacteria
>WENV183730644
PJTS01000251
165860
Alphaproteobacteria
TGG
Pro
>WENV183730450
PJTS01000025
239035
Alphaproteobacteria
CGC
Ala
>WENV183730388
PJTS01000003
162801
Alphaproteobacteria
GTG
His
>WENV183730421
PJTS01000012
236134
Alphaproteobacteria
TAC
Val
>WENV183730918
PJTS01002015
339434
Alphaproteobacteria
CCC
Gly
>WENV183731250
PJTS01027344
339454
Alphaproteobacteria
>WENV183731163
PJTS01014649
339457
Alphaproteobacteria
>WENV183730889
PJTS01001795
146820
Alphaproteobacteria
CGG
Pro
>WENV183731044
PJTS01005188
413626
Alphaproteobacteria
TCC
Gly
>WENV183730894
PJTS01001846
146818
Alphaproteobacteria
CAT
Met
>WENV183730934
PJTS01002224
283763
Alphaproteobacteria
TGC
Ala
>WENV183731226
PJTS01022568
26410
Alphaproteobacteria
TGA
Ser
>WENV183730460
PJTS01000036
24459
Alphaproteobacteria
CGA
Ser
>WENV183731294
PJTS01033756
350547
Alphaproteobacteria
GCC
Gly
>WENV183730944
PJTS01002411
153154
Alphaproteobacteria
TAC
Val
>WENV183730672
PJTS01000313
173246
Alphaproteobacteria
CCT
Arg
>WENV183730869
PJTS01001571
339432
Alphaproteobacteria
GTT
Asn
>WENV183730612
PJTS01000193
239037
Alphaproteobacteria
TTT
Lys
>WENV183730891
PJTS01001816
364533
Alphaproteobacteria
GCC
Gly
>WENV183730975
PJTS01002906
25533
Alphaproteobacteria
GGA
Ser
>WENV183730380
PJTS01000001
237281
Alphaproteobacteria
CGT
Thr
>WENV183730972
PJTS01002884
284043
Alphaproteobacteria
CGT
Thr
>WENV183730795
PJTS01000796
10657
Alphaproteobacteria
GCT
Ser
>WENV183730508
PJTS01000080
80837
Alphaproteobacteria
TAA
Leu
>WENV183731005
PJTS01003643
338622
Alphaproteobacteria
GTT
Asn
>WENV183730711
PJTS01000381
338622
Alphaproteobacteria
GTT
Asn
>WENV183730475
PJTS01000049
338622
Alphaproteobacteria
GTT
Asn
>WENV183730905
PJTS01001982
10642
Alphaproteobacteria
GCT
Ser
>WENV183730873
PJTS01001631
339436
Alphaproteobacteria
>WENV183731020
PJTS01004004
352191
Alphaproteobacteria
GGT
Thr
>WENV183730381
PJTS01000001
187569
Alphaproteobacteria
CCG
Arg
>WENV183731097
PJTS01008950
266073
Alphaproteobacteria
TTT
Lys
>WENV183730506
PJTS01000079
369678
Alphaproteobacteria
GGT
Thr
>WENV183731007
PJTS01003652
146817
Alphaproteobacteria
GTG
His
>WENV183730923
PJTS01002084
237439
Alphaproteobacteria
CTT
Lys
>WENV183730404
PJTS01000005
62052
Alphaproteobacteria
GAG
Leu
>WENV183731039
PJTS01004626
411617
Alphaproteobacteria
GCA
Cys
>WENV183731041
PJTS01004883
113767
Alphaproteobacteria
>WENV183730507
PJTS01000079
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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