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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
71 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183739071
PJUE01001413
426418
Alphaproteobacteria
CTG
Gln
>WENV183738710
PJUE01000120
412798
Alphaproteobacteria
CTG
Gln
>WENV183738793
PJUE01000200
146819
Alphaproteobacteria
TTT
Lys
>WENV183738496
PJUE01000006
237800
Alphaproteobacteria
>WENV183739644
PJUE01046869
58865
Alphaproteobacteria
GAG
Leu
>WENV183738569
PJUE01000024
237489
Alphaproteobacteria
CAT
Met
>WENV183739076
PJUE01001430
237489
Alphaproteobacteria
CAT
Met
>WENV183738516
PJUE01000009
147152
Alphaproteobacteria
ACG
Arg
>WENV183739505
PJUE01024927
144964
Alphaproteobacteria
TGG
Pro
>WENV183739616
PJUE01042489
81064
Alphaproteobacteria
GTA
Tyr
>WENV183738970
PJUE01000678
23605
Alphaproteobacteria
CGA
Ser
>WENV183738563
PJUE01000024
146875
Alphaproteobacteria
GTG
His
>WENV183739442
PJUE01017762
146683
Alphaproteobacteria
GTG
His
>WENV183739272
PJUE01005667
148279
Alphaproteobacteria
TCT
Arg
>WENV183739131
PJUE01002076
256971
Alphaproteobacteria
TGT
Thr
>WENV183738467
PJUE01000003
256971
Alphaproteobacteria
TGT
Thr
>WENV183738570
PJUE01000024
165860
Alphaproteobacteria
TGG
Pro
>WENV183739116
PJUE01001833
185767
Alphaproteobacteria
CCG
Arg
>WENV183738670
PJUE01000080
185767
Alphaproteobacteria
CCG
Arg
>WENV183739212
PJUE01003255
31506
Alphaproteobacteria
TGA
Ser
>WENV183738504
PJUE01000006
31506
Alphaproteobacteria
TGA
Ser
>WENV183739544
PJUE01029903
236134
Alphaproteobacteria
TAC
Val
>WENV183739651
PJUE01050623
23620
Alphaproteobacteria
GCT
Ser
>WENV183739634
PJUE01045216
23620
Alphaproteobacteria
GCT
Ser
>WENV183739606
PJUE01039590
385404
Alphaproteobacteria
CTC
Glu
>WENV183738545
PJUE01000015
385404
Alphaproteobacteria
CTC
Glu
>WENV183738760
PJUE01000173
339434
Alphaproteobacteria
CCC
Gly
>WENV183739429
PJUE01016187
239295
Alphaproteobacteria
CAT
Met
>WENV183738913
PJUE01000429
146820
Alphaproteobacteria
CGG
Pro
>WENV183738462
PJUE01000003
74116
Alphaproteobacteria
CAG
Leu
>WENV183739117
PJUE01001841
146818
Alphaproteobacteria
CAT
Met
>WENV183738588
PJUE01000031
236004
Alphaproteobacteria
TTT
Lys
>WENV183739105
PJUE01001704
319584
Alphaproteobacteria
CGC
Ala
>WENV183738464
PJUE01000003
319584
Alphaproteobacteria
CGC
Ala
>WENV183739516
PJUE01026911
319095
Alphaproteobacteria
TAC
Val
>WENV183739434
PJUE01016907
319095
Alphaproteobacteria
TAC
Val
>WENV183738842
PJUE01000287
153154
Alphaproteobacteria
TAC
Val
>WENV183739008
PJUE01000885
339432
Alphaproteobacteria
GTT
Asn
>WENV183738564
PJUE01000024
167926
Alphaproteobacteria
CAT
Met
>WENV183739085
PJUE01001534
364533
Alphaproteobacteria
GCC
Gly
>WENV183739372
PJUE01011335
29390
Alphaproteobacteria
CGA
Ser
>WENV183738939
PJUE01000542
25533
Alphaproteobacteria
GGA
Ser
>WENV183739659
PJUE01052463
75256
Alphaproteobacteria
CAG
Leu
>WENV183739507
PJUE01025000
75256
Alphaproteobacteria
CAG
Leu
>WENV183739305
PJUE01006895
411642
Alphaproteobacteria
GCA
Cys
>WENV183739529
PJUE01028933
10657
Alphaproteobacteria
GCT
Ser
>WENV183739425
PJUE01015547
10657
Alphaproteobacteria
GCT
Ser
>WENV183739032
PJUE01001029
10657
Alphaproteobacteria
GCT
Ser
>WENV183739542
PJUE01029609
338622
Alphaproteobacteria
GTT
Asn
>WENV183739040
PJUE01001120
338622
Alphaproteobacteria
GTT
Asn
>WENV183738652
PJUE01000060
338622
Alphaproteobacteria
GTT
Asn
>WENV183738497
PJUE01000006
338622
Alphaproteobacteria
GTT
Asn
>WENV183738930
PJUE01000472
10642
Alphaproteobacteria
GCT
Ser
>WENV183739607
PJUE01039683
144972
Alphaproteobacteria
>WENV183739515
PJUE01026675
144972
Alphaproteobacteria
>WENV183739437
PJUE01017086
144972
Alphaproteobacteria
>WENV183738997
PJUE01000808
339436
Alphaproteobacteria
>WENV183739394
PJUE01013531
95936
Alphaproteobacteria
TAA
Leu
>WENV183739473
PJUE01021611
96322
Alphaproteobacteria
CAA
Leu
>WENV183738675
PJUE01000086
369678
Alphaproteobacteria
GGT
Thr
>WENV183739628
PJUE01044189
144969
Alphaproteobacteria
CGG
Pro
>WENV183738466
PJUE01000003
21074
Alphaproteobacteria
GGA
Ser
>WENV183739417
PJUE01014806
95631
Alphaproteobacteria
TAG
Leu
>WENV183739403
PJUE01014199
146848
Alphaproteobacteria
GTG
His
>WENV183738498
PJUE01000006
101826
Alphaproteobacteria
TAG
Leu
>WENV183739046
PJUE01001179
146817
Alphaproteobacteria
GTG
His
>WENV183739202
PJUE01003087
237439
Alphaproteobacteria
CTT
Lys
>WENV183738586
PJUE01000031
62052
Alphaproteobacteria
GAG
Leu
>WENV183739136
PJUE01002117
343498
Alphaproteobacteria
GGT
Thr
>WENV183739143
PJUE01002264
426627
Alphaproteobacteria
TCC
Gly
>WENV183738676
PJUE01000086
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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