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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
114 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639429
OCRL01000004
280901
Bacillota
GTT
Asn
>WENV180639436
OCRL01000004
280901
Bacillota
GTT
Asn
>WENV180639437
OCRL01000004
20242
Bacillota
GCT
Ser
>WENV180639430
OCRL01000004
20285
Bacillota
GCT
Ser
>WENV180639433
OCRL01000004
480424
Bacillota
TCC
Gly
>WENV180639439
OCRL01000005
99922
Bacillota
GAG
Leu
>WENV180639491
OCRL01000013
356660
Bacillota
CTT
Lys
>WENV180639492
OCRL01000013
356660
Bacillota
CTT
Lys
>WENV180639493
OCRL01000013
356660
Bacillota
CTT
Lys
>WENV180639536
OCRL01000021
280902
Bacillota
GAC
Val
>WENV180639538
OCRL01000022
8514
Bacillota
CGA
Ser
>WENV180639547
OCRL01000027
401881
Bacillota
CCT
Arg
>WENV180639612
OCRL01000039
176252
Bacillota
CGT
Thr
>WENV180639610
OCRL01000039
73066
Bacillota
GAG
Leu
>WENV180639636
OCRL01000050
47119
Bacillota
TAA
Leu
>WENV180639637
OCRL01000050
179130
Bacillota
ACG
Arg
>WENV180639633
OCRL01000050
119278
Bacillota
TAG
Leu
>WENV180639656
OCRL01000057
145872
Bacillota
GTA
Tyr
>WENV180639658
OCRL01000057
398934
Bacillota
CCG
Arg
>WENV180639664
OCRL01000060
399041
Bacillota
CCA
Trp
>WENV180639665
OCRL01000060
399041
Bacillota
CCA
Trp
>WENV180639698
OCRL01000074
281307
Bacillota
GGT
Thr
>WENV180639700
OCRL01000074
399273
Bacillota
CCC
Gly
>WENV180639696
OCRL01000074
281300
Bacillota
GAA
Phe
>WENV180639697
OCRL01000074
399272
Bacillota
GCA
Cys
>WENV180639699
OCRL01000074
117891
Bacillota
TAG
Leu
>WENV180639708
OCRL01000079
280903
Bacillota
>WENV180639707
OCRL01000079
280901
Bacillota
GTT
Asn
>WENV180639710
OCRL01000080
399269
Bacillota
CTC
Glu
>WENV180639714
OCRL01000083
118683
Bacillota
GTA
Tyr
>WENV180639719
OCRL01000084
280895
Bacillota
GTG
His
>WENV180639721
OCRL01000084
399057
Bacillota
GCC
Gly
>WENV180639729
OCRL01000090
100513
Bacillota
CAG
Leu
>WENV180639730
OCRL01000090
13468
Bacillota
CGA
Ser
>WENV180639755
OCRL01000113
176046
Bacillota
GTT
Asn
>WENV180639767
OCRL01000122
281299
Bacillota
TTT
Lys
>WENV180639763
OCRL01000122
480520
Bacillota
TCC
Gly
>WENV180639766
OCRL01000122
399274
Bacillota
TTG
Gln
>WENV180639764
OCRL01000122
176679
Bacillota
TCT
Arg
>WENV180639765
OCRL01000122
330433
Bacillota
GTG
His
>WENV180639777
OCRL01000125
46658
Bacillota
AAG
Leu
>WENV180639775
OCRL01000125
179563
Bacillota
GAT
Ile
>WENV180639770
OCRL01000125
228403
Bacillota
CAT
Met
>WENV180639785
OCRL01000130
380987
Bacillota
GTC
Asp
>WENV180639803
OCRL01000136
288974
Bacillota
CTT
Lys
>WENV180639813
OCRL01000148
280870
Bacillota
TGC
Ala
>WENV180639812
OCRL01000148
176562
Bacillota
CAT
Met
>WENV180639814
OCRL01000148
281300
Bacillota
GAA
Phe
>WENV180639817
OCRL01000149
485753
Bacillota
GGT
Thr
>WENV180639833
OCRL01000153
307633
Bacillota
CAT
Met
>WENV180639826
OCRL01000153
46686
Bacillota
TAA
Leu
>WENV180639829
OCRL01000153
46686
Bacillota
TAA
Leu
>WENV180639832
OCRL01000153
46686
Bacillota
TAA
Leu
>WENV180639825
OCRL01000153
400839
Bacillota
ACG
Arg
>WENV180639822
OCRL01000153
20276
Bacillota
GCT
Ser
>WENV180639824
OCRL01000153
20276
Bacillota
GCT
Ser
>WENV180639821
OCRL01000153
20275
Bacillota
TGA
Ser
>WENV180639823
OCRL01000153
20275
Bacillota
TGA
Ser
>WENV180639837
OCRL01000156
398936
Bacillota
CCT
Arg
>WENV180639846
OCRL01000166
400140
Bacillota
TTC
Glu
>WENV180639875
OCRL01000187
399058
Bacillota
CCT
Arg
>WENV180639903
OCRL01000217
56156
Bacillota
>WENV180639920
OCRL01000241
46658
Bacillota
AAG
Leu
>WENV180639919
OCRL01000241
98231
Bacillota
CAA
Leu
>WENV180639938
OCRL01000254
20257
Bacillota
>WENV180639985
OCRL01000299
29462
Bacillota
GGA
Ser
>WENV180639984
OCRL01000299
399271
Bacillota
CCT
Arg
>WENV180640014
OCRL01000335
176678
Bacillota
GTC
Asp
>WENV180640013
OCRL01000335
368693
Bacillota
TAC
Val
>WENV180640012
OCRL01000335
399261
Bacillota
>WENV180640029
OCRL01000342
480520
Bacillota
TCC
Gly
>WENV180640083
OCRL01000460
487804
Bacillota
GGT
Thr
>WENV180640093
OCRL01000512
176678
Bacillota
GTC
Asp
>WENV180640092
OCRL01000512
281300
Bacillota
GAA
Phe
>WENV180640094
OCRL01000512
399260
Bacillota
TGT
Thr
>WENV180640095
OCRL01000512
399261
Bacillota
>WENV180640107
OCRL01000544
176681
Bacillota
TCG
Arg
>WENV180640111
OCRL01000551
98231
Bacillota
CAA
Leu
>WENV180640122
OCRL01000614
118683
Bacillota
GTA
Tyr
>WENV180640119
OCRL01000614
400140
Bacillota
TTC
Glu
>WENV180640130
OCRL01000644
281299
Bacillota
TTT
Lys
>WENV180640129
OCRL01000644
399274
Bacillota
TTG
Gln
>WENV180640128
OCRL01000644
330433
Bacillota
GTG
His
>WENV180640149
OCRL01000686
281299
Bacillota
TTT
Lys
>WENV180640164
OCRL01000776
137739
Bacillota
TAG
Leu
>WENV180640175
OCRL01000882
176548
Bacillota
CAT
Met
>WENV180640177
OCRL01000882
8513
Bacillota
TGA
Ser
>WENV180640181
OCRL01000882
362983
Bacillota
GTG
His
>WENV180640180
OCRL01000882
280900
Bacillota
GAA
Phe
>WENV180640182
OCRL01000882
480424
Bacillota
TCC
Gly
>WENV180640176
OCRL01000882
176319
Bacillota
CAT
Met
>WENV180640188
OCRL01000891
46665
Bacillota
TAA
Leu
>WENV180640189
OCRL01000891
176250
Bacillota
ACG
Arg
>WENV180640187
OCRL01000891
476007
Bacillota
GCC
Gly
>WENV180640194
OCRL01000905
281299
Bacillota
TTT
Lys
>WENV180640197
OCRL01000905
480520
Bacillota
TCC
Gly
>WENV180640193
OCRL01000905
399274
Bacillota
TTG
Gln
>WENV180640191
OCRL01000905
176679
Bacillota
TCT
Arg
>WENV180640192
OCRL01000905
330433
Bacillota
GTG
His
>WENV180640195
OCRL01000905
117892
Bacillota
TAG
Leu
>WENV180640196
OCRL01000905
399275
Bacillota
GCC
Gly
>WENV180640200
OCRL01000930
53200
Bacillota
TAA
Leu
>WENV180640221
OCRL01000958
145777
Bacillota
TAG
Leu
>WENV180640255
OCRL01001008
511424
Bacillota
>WENV180640259
OCRL01001044
398935
Bacillota
>WENV180640260
OCRL01001044
65075
Bacillota
TAA
Leu
>WENV180640262
OCRL01001054
368693
Bacillota
TAC
Val
>WENV180640263
OCRL01001054
399260
Bacillota
TGT
Thr
>WENV180640278
OCRL01001127
13236
Bacillota
GGA
Ser
>WENV180640283
OCRL01001139
280900
Bacillota
GAA
Phe
>WENV180640284
OCRL01001146
451446
Bacillota
TTG
Gln
>WENV180640285
OCRL01001164
281306
Bacillota
TGC
Ala
>WENV180640299
OCRL01001359
8724
Bacillota
GCT
Ser
>WENV180640302
OCRL01001946
117890
Bacillota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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