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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
122 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183730613
PJTS01000194
146962
Bacteroidota
CAT
Met
>WENV183731063
PJTS01006457
146962
Bacteroidota
CAT
Met
>WENV183730657
PJTS01000273
159146
Bacteroidota
TCG
Arg
>WENV183731072
PJTS01006861
159146
Bacteroidota
TCG
Arg
>WENV183730822
PJTS01000985
412419
Bacteroidota
CCA
Trp
>WENV183731059
PJTS01005906
412419
Bacteroidota
CCA
Trp
>WENV183730547
PJTS01000119
147867
Bacteroidota
GTG
His
>WENV183730761
PJTS01000599
147867
Bacteroidota
GTG
His
>WENV183730583
PJTS01000152
145315
Bacteroidota
CAT
Met
>WENV183730753
PJTS01000549
145315
Bacteroidota
CAT
Met
>WENV183730584
PJTS01000152
147864
Bacteroidota
TGG
Pro
>WENV183730798
PJTS01000842
147864
Bacteroidota
TGG
Pro
>WENV183730856
PJTS01001455
147864
Bacteroidota
TGG
Pro
>WENV183730955
PJTS01002652
147864
Bacteroidota
TGG
Pro
>WENV183730959
PJTS01002709
147864
Bacteroidota
TGG
Pro
>WENV183731036
PJTS01004561
147864
Bacteroidota
TGG
Pro
>WENV183730833
PJTS01001182
45276
Bacteroidota
TGA
Ser
>WENV183730680
PJTS01000322
45276
Bacteroidota
TGA
Ser
>WENV183730637
PJTS01000235
45276
Bacteroidota
TGA
Ser
>WENV183730587
PJTS01000159
45276
Bacteroidota
TGA
Ser
>WENV183731080
PJTS01007619
119517
Bacteroidota
CAA
Leu
>WENV183730936
PJTS01002245
119517
Bacteroidota
CAA
Leu
>WENV183730755
PJTS01000590
119517
Bacteroidota
CAA
Leu
>WENV183730686
PJTS01000334
119517
Bacteroidota
CAA
Leu
>WENV183730545
PJTS01000119
119517
Bacteroidota
CAA
Leu
>WENV183731030
PJTS01004264
51937
Bacteroidota
TAA
Leu
>WENV183730656
PJTS01000269
51937
Bacteroidota
TAA
Leu
>WENV183730635
PJTS01000235
51937
Bacteroidota
TAA
Leu
>WENV183730893
PJTS01001845
173775
Bacteroidota
GTG
His
>WENV183730931
PJTS01002194
241019
Bacteroidota
CAT
Met
>WENV183730930
PJTS01002194
241019
Bacteroidota
CAT
Met
>WENV183730836
PJTS01001246
235817
Bacteroidota
GAA
Phe
>WENV183730835
PJTS01001246
235817
Bacteroidota
GAA
Phe
>WENV183730738
PJTS01000465
235817
Bacteroidota
GAA
Phe
>WENV183731297
PJTS01034102
237606
Bacteroidota
GCC
Gly
>WENV183731115
PJTS01010096
237606
Bacteroidota
GCC
Gly
>WENV183730948
PJTS01002448
237606
Bacteroidota
GCC
Gly
>WENV183730643
PJTS01000242
59351
Bacteroidota
GAG
Leu
>WENV183731325
PJTS01038446
415980
Bacteroidota
TTG
Gln
>WENV183731069
PJTS01006634
415980
Bacteroidota
TTG
Gln
>WENV183731068
PJTS01006634
415980
Bacteroidota
TTG
Gln
>WENV183730870
PJTS01001587
415980
Bacteroidota
TTG
Gln
>WENV183731066
PJTS01006616
113741
Bacteroidota
GTA
Tyr
>WENV183731051
PJTS01005600
113741
Bacteroidota
GTA
Tyr
>WENV183731034
PJTS01004466
113741
Bacteroidota
GTA
Tyr
>WENV183731024
PJTS01004167
113741
Bacteroidota
GTA
Tyr
>WENV183730867
PJTS01001561
113741
Bacteroidota
GTA
Tyr
>WENV183731173
PJTS01015229
338625
Bacteroidota
TTC
Glu
>WENV183730730
PJTS01000406
267805
Bacteroidota
TCC
Gly
>WENV183731245
PJTS01026107
95728
Bacteroidota
GTA
Tyr
>WENV183730985
PJTS01003261
182270
Bacteroidota
CAT
Met
>WENV183731004
PJTS01003641
241469
Bacteroidota
GAA
Phe
>WENV183730655
PJTS01000267
241469
Bacteroidota
GAA
Phe
>WENV183731052
PJTS01005626
168744
Bacteroidota
GTG
His
>WENV183731346
PJTS01042137
239858
Bacteroidota
TTT
Lys
>WENV183731253
PJTS01027518
239858
Bacteroidota
TTT
Lys
>WENV183730581
PJTS01000151
239858
Bacteroidota
TTT
Lys
>WENV183730579
PJTS01000151
239858
Bacteroidota
TTT
Lys
>WENV183730578
PJTS01000151
239858
Bacteroidota
TTT
Lys
>WENV183731093
PJTS01008696
347983
Bacteroidota
TTC
Glu
>WENV183730732
PJTS01000408
347983
Bacteroidota
TTC
Glu
>WENV183730561
PJTS01000130
347983
Bacteroidota
TTC
Glu
>WENV183730560
PJTS01000130
347983
Bacteroidota
TTC
Glu
>WENV183731092
PJTS01008660
191087
Bacteroidota
TCT
Arg
>WENV183731103
PJTS01009359
155147
Bacteroidota
GGC
Ala
>WENV183731255
PJTS01027546
159029
Bacteroidota
GTG
His
>WENV183730585
PJTS01000155
159029
Bacteroidota
GTG
His
>WENV183730996
PJTS01003549
412189
Bacteroidota
CCA
Trp
>WENV183730974
PJTS01002904
412189
Bacteroidota
CCA
Trp
>WENV183730763
PJTS01000605
412189
Bacteroidota
CCA
Trp
>WENV183731077
PJTS01007373
413186
Bacteroidota
>WENV183730951
PJTS01002520
413186
Bacteroidota
>WENV183731121
PJTS01010586
238764
Bacteroidota
>WENV183731208
PJTS01019275
238491
Bacteroidota
TTT
Lys
>WENV183731176
PJTS01016374
238491
Bacteroidota
TTT
Lys
>WENV183730598
PJTS01000169
127215
Bacteroidota
TAC
Val
>WENV183730596
PJTS01000169
127215
Bacteroidota
TAC
Val
>WENV183730929
PJTS01002194
238600
Bacteroidota
CAT
Met
>WENV183730572
PJTS01000136
238600
Bacteroidota
CAT
Met
>WENV183730571
PJTS01000136
238600
Bacteroidota
CAT
Met
>WENV183730570
PJTS01000136
238600
Bacteroidota
CAT
Met
>WENV183730569
PJTS01000136
238600
Bacteroidota
CAT
Met
>WENV183730913
PJTS01001986
342824
Bacteroidota
GGT
Thr
>WENV183730731
PJTS01000406
342824
Bacteroidota
GGT
Thr
>WENV183730641
PJTS01000242
199370
Bacteroidota
GTT
Asn
>WENV183731060
PJTS01006023
46876
Bacteroidota
TGA
Ser
>WENV183730895
PJTS01001857
46876
Bacteroidota
TGA
Ser
>WENV183730597
PJTS01000169
126680
Bacteroidota
TAC
Val
>WENV183730839
PJTS01001265
411719
Bacteroidota
GCA
Cys
>WENV183730689
PJTS01000346
411719
Bacteroidota
GCA
Cys
>WENV183731167
PJTS01014919
296886
Bacteroidota
>WENV183730631
PJTS01000230
160686
Bacteroidota
CAT
Met
>WENV183731038
PJTS01004585
160686
Bacteroidota
CAT
Met
>WENV183730986
PJTS01003300
25256
Bacteroidota
GCT
Ser
>WENV183731078
PJTS01007381
152147
Bacteroidota
TCT
Arg
>WENV183730708
PJTS01000369
152147
Bacteroidota
TCT
Arg
>WENV183730859
PJTS01001460
235822
Bacteroidota
TGT
Thr
>WENV183730858
PJTS01001460
235822
Bacteroidota
TGT
Thr
>WENV183730857
PJTS01001460
235822
Bacteroidota
TGT
Thr
>WENV183730728
PJTS01000406
235822
Bacteroidota
TGT
Thr
>WENV183731332
PJTS01039420
59930
Bacteroidota
GCT
Ser
>WENV183730706
PJTS01000369
59930
Bacteroidota
GCT
Ser
>WENV183730582
PJTS01000152
147863
Bacteroidota
CAT
Met
>WENV183731065
PJTS01006616
150454
Bacteroidota
TGT
Thr
>WENV183731023
PJTS01004167
150454
Bacteroidota
TGT
Thr
>WENV183731013
PJTS01003690
150454
Bacteroidota
TGT
Thr
>WENV183731012
PJTS01003690
150454
Bacteroidota
TGT
Thr
>WENV183730819
PJTS01000964
150454
Bacteroidota
TGT
Thr
>WENV183730818
PJTS01000964
150454
Bacteroidota
TGT
Thr
>WENV183731091
PJTS01008660
128249
Bacteroidota
TGG
Pro
>WENV183731289
PJTS01033156
16286
Bacteroidota
GGA
Ser
>WENV183730825
PJTS01000999
47714
Bacteroidota
TGA
Ser
>WENV183730910
PJTS01001986
237427
Bacteroidota
TGT
Thr
>WENV183731246
PJTS01026107
360629
Bacteroidota
GGT
Thr
>WENV183731129
PJTS01011763
360629
Bacteroidota
GGT
Thr
>WENV183731067
PJTS01006616
360629
Bacteroidota
GGT
Thr
>WENV183731025
PJTS01004167
360629
Bacteroidota
GGT
Thr
>WENV183730687
PJTS01000335
96696
Bacteroidota
TAG
Leu
>WENV183731116
PJTS01010096
37199
Bacteroidota
TAA
Leu
>WENV183731150
PJTS01013365
45130
Bacteroidota
TGA
Ser
>WENV183731252
PJTS01027518
83316
Bacteroidota
GAG
Leu
>WENV183730580
PJTS01000151
83316
Bacteroidota
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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