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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183736110
PJUC01000030
413186
Bacteroidota
>WENV183736599
PJUC01019447
119517
Bacteroidota
CAA
Leu
>WENV183736593
PJUC01018532
119517
Bacteroidota
CAA
Leu
>WENV183736522
PJUC01008623
119517
Bacteroidota
CAA
Leu
>WENV183736111
PJUC01000030
119517
Bacteroidota
CAA
Leu
>WENV183736039
PJUC01000004
146962
Bacteroidota
CAT
Met
>WENV183736154
PJUC01000059
145315
Bacteroidota
CAT
Met
>WENV183736253
PJUC01000286
241019
Bacteroidota
CAT
Met
>WENV183736441
PJUC01003540
238600
Bacteroidota
CAT
Met
>WENV183736440
PJUC01003540
238600
Bacteroidota
CAT
Met
>WENV183736254
PJUC01000286
238600
Bacteroidota
CAT
Met
>WENV183736060
PJUC01000009
160686
Bacteroidota
CAT
Met
>WENV183736442
PJUC01003666
147863
Bacteroidota
CAT
Met
>WENV183736359
PJUC01001080
147863
Bacteroidota
CAT
Met
>WENV183736358
PJUC01001080
147863
Bacteroidota
CAT
Met
>WENV183736395
PJUC01001755
412419
Bacteroidota
CCA
Trp
>WENV183736290
PJUC01000422
418371
Bacteroidota
CCA
Trp
>WENV183736141
PJUC01000046
412189
Bacteroidota
CCA
Trp
>WENV183736068
PJUC01000013
412189
Bacteroidota
CCA
Trp
>WENV183736103
PJUC01000027
256428
Bacteroidota
GAA
Phe
>WENV183736675
PJUC01038995
235817
Bacteroidota
GAA
Phe
>WENV183736549
PJUC01012248
235817
Bacteroidota
GAA
Phe
>WENV183736129
PJUC01000040
235817
Bacteroidota
GAA
Phe
>WENV183736128
PJUC01000040
235817
Bacteroidota
GAA
Phe
>WENV183736080
PJUC01000019
241469
Bacteroidota
GAA
Phe
>WENV183736026
PJUC01000002
241469
Bacteroidota
GAA
Phe
>WENV183736353
PJUC01001018
59351
Bacteroidota
GAG
Leu
>WENV183736232
PJUC01000196
59351
Bacteroidota
GAG
Leu
>WENV183736037
PJUC01000004
83316
Bacteroidota
GAG
Leu
>WENV183736630
PJUC01027046
411719
Bacteroidota
GCA
Cys
>WENV183736279
PJUC01000380
411719
Bacteroidota
GCA
Cys
>WENV183736123
PJUC01000038
237606
Bacteroidota
GCC
Gly
>WENV183736153
PJUC01000054
25256
Bacteroidota
GCT
Ser
>WENV183736065
PJUC01000012
59930
Bacteroidota
GCT
Ser
>WENV183736059
PJUC01000009
148243
Bacteroidota
GGC
Ala
>WENV183736394
PJUC01001755
342824
Bacteroidota
GGT
Thr
>WENV183736289
PJUC01000422
342824
Bacteroidota
GGT
Thr
>WENV183736140
PJUC01000046
360629
Bacteroidota
GGT
Thr
>WENV183736139
PJUC01000046
113741
Bacteroidota
GTA
Tyr
>WENV183736118
PJUC01000035
113741
Bacteroidota
GTA
Tyr
>WENV183736042
PJUC01000004
113741
Bacteroidota
GTA
Tyr
>WENV183736229
PJUC01000189
166688
Bacteroidota
GTC
Asp
>WENV183736228
PJUC01000189
166688
Bacteroidota
GTC
Asp
>WENV183736530
PJUC01009291
147867
Bacteroidota
GTG
His
>WENV183736618
PJUC01024599
147867
Bacteroidota
GTG
His
>WENV183736282
PJUC01000388
173775
Bacteroidota
GTG
His
>WENV183736064
PJUC01000012
159029
Bacteroidota
GTG
His
>WENV183736537
PJUC01010364
199370
Bacteroidota
GTT
Asn
>WENV183736685
PJUC01040271
51937
Bacteroidota
TAA
Leu
>WENV183736405
PJUC01001984
51937
Bacteroidota
TAA
Leu
>WENV183736182
PJUC01000092
51937
Bacteroidota
TAA
Leu
>WENV183736175
PJUC01000082
51937
Bacteroidota
TAA
Leu
>WENV183736124
PJUC01000038
37199
Bacteroidota
TAA
Leu
>WENV183736081
PJUC01000019
37199
Bacteroidota
TAA
Leu
>WENV183736152
PJUC01000053
127215
Bacteroidota
TAC
Val
>WENV183736151
PJUC01000053
127215
Bacteroidota
TAC
Val
>WENV183736027
PJUC01000002
96696
Bacteroidota
TAG
Leu
>WENV183736393
PJUC01001755
267805
Bacteroidota
TCC
Gly
>WENV183736288
PJUC01000422
267805
Bacteroidota
TCC
Gly
>WENV183736155
PJUC01000061
159146
Bacteroidota
TCG
Arg
>WENV183736067
PJUC01000012
152147
Bacteroidota
TCT
Arg
>WENV183736425
PJUC01002956
45276
Bacteroidota
TGA
Ser
>WENV183736209
PJUC01000145
45276
Bacteroidota
TGA
Ser
>WENV183736191
PJUC01000110
45276
Bacteroidota
TGA
Ser
>WENV183736602
PJUC01020344
151405
Bacteroidota
TGC
Ala
>WENV183736601
PJUC01019819
151405
Bacteroidota
TGC
Ala
>WENV183736683
PJUC01040268
151405
Bacteroidota
TGC
Ala
>WENV183736682
PJUC01040220
151405
Bacteroidota
TGC
Ala
>WENV183736199
PJUC01000121
147864
Bacteroidota
TGG
Pro
>WENV183736365
PJUC01001199
147864
Bacteroidota
TGG
Pro
>WENV183736368
PJUC01001312
147864
Bacteroidota
TGG
Pro
>WENV183736369
PJUC01001312
147864
Bacteroidota
TGG
Pro
>WENV183736445
PJUC01003832
147864
Bacteroidota
TGG
Pro
>WENV183736556
PJUC01013025
147864
Bacteroidota
TGG
Pro
>WENV183736649
PJUC01034315
147864
Bacteroidota
TGG
Pro
>WENV183736650
PJUC01034918
147864
Bacteroidota
TGG
Pro
>WENV183736627
PJUC01026522
235822
Bacteroidota
TGT
Thr
>WENV183736510
PJUC01007532
235822
Bacteroidota
TGT
Thr
>WENV183736456
PJUC01004532
235822
Bacteroidota
TGT
Thr
>WENV183736455
PJUC01004532
235822
Bacteroidota
TGT
Thr
>WENV183736454
PJUC01004532
235822
Bacteroidota
TGT
Thr
>WENV183736138
PJUC01000046
150454
Bacteroidota
TGT
Thr
>WENV183736044
PJUC01000004
150454
Bacteroidota
TGT
Thr
>WENV183736043
PJUC01000004
150454
Bacteroidota
TGT
Thr
>WENV183736070
PJUC01000013
338625
Bacteroidota
TTC
Glu
>WENV183736156
PJUC01000061
347983
Bacteroidota
TTC
Glu
>WENV183736069
PJUC01000013
347983
Bacteroidota
TTC
Glu
>WENV183736025
PJUC01000002
415980
Bacteroidota
TTG
Gln
>WENV183736024
PJUC01000002
415980
Bacteroidota
TTG
Gln
>WENV183736038
PJUC01000004
239858
Bacteroidota
TTT
Lys
>WENV183736036
PJUC01000004
239858
Bacteroidota
TTT
Lys
>WENV183736035
PJUC01000004
239858
Bacteroidota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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