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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183743694
PJUJ01024195
119495
Bacteroidota
CAA
Leu
>WENV183743612
PJUJ01010278
340193
Bacteroidota
TTC
Glu
>WENV183743323
PJUJ01000490
412419
Bacteroidota
CCA
Trp
>WENV183743345
PJUJ01000578
412419
Bacteroidota
CCA
Trp
>WENV183742973
PJUJ01000002
147867
Bacteroidota
GTG
His
>WENV183742974
PJUJ01000002
147867
Bacteroidota
GTG
His
>WENV183743203
PJUJ01000149
147867
Bacteroidota
GTG
His
>WENV183743204
PJUJ01000149
147867
Bacteroidota
GTG
His
>WENV183743359
PJUJ01000627
145315
Bacteroidota
CAT
Met
>WENV183743518
PJUJ01003487
145315
Bacteroidota
CAT
Met
>WENV183743118
PJUJ01000042
147864
Bacteroidota
TGG
Pro
>WENV183743156
PJUJ01000066
147864
Bacteroidota
TGG
Pro
>WENV183743157
PJUJ01000066
147864
Bacteroidota
TGG
Pro
>WENV183743158
PJUJ01000066
147864
Bacteroidota
TGG
Pro
>WENV183743306
PJUJ01000389
147864
Bacteroidota
TGG
Pro
>WENV183743757
PJUJ01036703
147864
Bacteroidota
TGG
Pro
>WENV183743745
PJUJ01035661
45276
Bacteroidota
TGA
Ser
>WENV183743490
PJUJ01002150
45276
Bacteroidota
TGA
Ser
>WENV183743269
PJUJ01000288
45276
Bacteroidota
TGA
Ser
>WENV183743219
PJUJ01000160
45276
Bacteroidota
TGA
Ser
>WENV183743218
PJUJ01000160
45276
Bacteroidota
TGA
Ser
>WENV183742966
PJUJ01000002
45276
Bacteroidota
TGA
Ser
>WENV183743072
PJUJ01000021
119517
Bacteroidota
CAA
Leu
>WENV183742967
PJUJ01000002
119517
Bacteroidota
CAA
Leu
>WENV183743752
PJUJ01036631
51937
Bacteroidota
TAA
Leu
>WENV183743535
PJUJ01004537
51937
Bacteroidota
TAA
Leu
>WENV183743268
PJUJ01000287
51937
Bacteroidota
TAA
Leu
>WENV183743216
PJUJ01000160
51937
Bacteroidota
TAA
Leu
>WENV183743070
PJUJ01000021
51937
Bacteroidota
TAA
Leu
>WENV183743276
PJUJ01000307
256428
Bacteroidota
GAA
Phe
>WENV183743486
PJUJ01002141
126978
Bacteroidota
GAT
Ile
>WENV183743200
PJUJ01000143
235817
Bacteroidota
GAA
Phe
>WENV183743199
PJUJ01000143
235817
Bacteroidota
GAA
Phe
>WENV183743103
PJUJ01000037
235817
Bacteroidota
GAA
Phe
>WENV183743024
PJUJ01000009
59351
Bacteroidota
GAG
Leu
>WENV183743707
PJUJ01026924
148416
Bacteroidota
GTT
Asn
>WENV183743472
PJUJ01001844
267483
Bacteroidota
TGT
Thr
>WENV183743474
PJUJ01001844
267805
Bacteroidota
TCC
Gly
>WENV183743280
PJUJ01000308
267805
Bacteroidota
TCC
Gly
>WENV183743040
PJUJ01000012
267805
Bacteroidota
TCC
Gly
>WENV183743551
PJUJ01005504
44922
Bacteroidota
TGA
Ser
>WENV183743627
PJUJ01012329
237429
Bacteroidota
TTT
Lys
>WENV183743626
PJUJ01012329
237429
Bacteroidota
TTT
Lys
>WENV183743495
PJUJ01002304
237429
Bacteroidota
TTT
Lys
>WENV183743438
PJUJ01001213
151405
Bacteroidota
TGC
Ala
>WENV183743258
PJUJ01000259
127215
Bacteroidota
TAC
Val
>WENV183743256
PJUJ01000259
127215
Bacteroidota
TAC
Val
>WENV183743016
PJUJ01000008
127215
Bacteroidota
TAC
Val
>WENV183743014
PJUJ01000008
127215
Bacteroidota
TAC
Val
>WENV183743473
PJUJ01001844
81622
Bacteroidota
GTA
Tyr
>WENV183743298
PJUJ01000359
149691
Bacteroidota
GTT
Asn
>WENV183743764
PJUJ01036811
238600
Bacteroidota
CAT
Met
>WENV183743763
PJUJ01036811
238600
Bacteroidota
CAT
Met
>WENV183743754
PJUJ01036694
238600
Bacteroidota
CAT
Met
>WENV183743753
PJUJ01036694
238600
Bacteroidota
CAT
Met
>WENV183743611
PJUJ01010278
238600
Bacteroidota
CAT
Met
>WENV183743120
PJUJ01000043
238600
Bacteroidota
CAT
Met
>WENV183743018
PJUJ01000008
238600
Bacteroidota
CAT
Met
>WENV183743017
PJUJ01000008
238600
Bacteroidota
CAT
Met
>WENV183743475
PJUJ01001844
342824
Bacteroidota
GGT
Thr
>WENV183743281
PJUJ01000308
342824
Bacteroidota
GGT
Thr
>WENV183743041
PJUJ01000012
342824
Bacteroidota
GGT
Thr
>WENV183743022
PJUJ01000009
199370
Bacteroidota
GTT
Asn
>WENV183743257
PJUJ01000259
126680
Bacteroidota
TAC
Val
>WENV183743015
PJUJ01000008
126680
Bacteroidota
TAC
Val
>WENV183743245
PJUJ01000210
166688
Bacteroidota
GTC
Asp
>WENV183743244
PJUJ01000210
166688
Bacteroidota
GTC
Asp
>WENV183743153
PJUJ01000066
411719
Bacteroidota
GCA
Cys
>WENV183743316
PJUJ01000447
235822
Bacteroidota
TGT
Thr
>WENV183743038
PJUJ01000012
235822
Bacteroidota
TGT
Thr
>WENV183742971
PJUJ01000002
235822
Bacteroidota
TGT
Thr
>WENV183743766
PJUJ01036924
145310
Bacteroidota
TGC
Ala
>WENV183743756
PJUJ01036702
145310
Bacteroidota
TGC
Ala
>WENV183743742
PJUJ01034666
145310
Bacteroidota
TGC
Ala
>WENV183743155
PJUJ01000066
147863
Bacteroidota
CAT
Met
>WENV183743154
PJUJ01000066
147863
Bacteroidota
CAT
Met
>WENV183743542
PJUJ01004842
45811
Bacteroidota
TAA
Leu
>WENV183743540
PJUJ01004842
45811
Bacteroidota
TAA
Leu
>WENV183743343
PJUJ01000565
237427
Bacteroidota
TGT
Thr
>WENV183742972
PJUJ01000002
237427
Bacteroidota
TGT
Thr
>WENV183742970
PJUJ01000002
237427
Bacteroidota
TGT
Thr
>WENV183743528
PJUJ01003729
23420
Bacteroidota
GCT
Ser
>WENV183743557
PJUJ01006144
130083
Bacteroidota
TAC
Val
>WENV183743554
PJUJ01005615
130083
Bacteroidota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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