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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
138 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170229277
CEQG01096996
275843
Alphaproteobacteria
CCT
Arg
>WENV170229460
CEQG01122139
275828
Alphaproteobacteria
GTC
Asp
>WENV170228770
CEQG01039010
452917
Alphaproteobacteria
TAC
Val
>WENV170229030
CEQG01066290
655167
Alphaproteobacteria
TTC
Glu
>WENV170229351
CEQG01108346
655167
Alphaproteobacteria
TTC
Glu
>WENV170228860
CEQG01047734
273448
Alphaproteobacteria
CGG
Pro
>WENV170228818
CEQG01044990
273805
Alphaproteobacteria
ACG
Arg
>WENV170228956
CEQG01056713
452884
Alphaproteobacteria
CCA
Trp
>WENV170228345
CEQG01003223
455289
Alphaproteobacteria
TTT
Lys
>WENV170228575
CEQG01022591
273905
Alphaproteobacteria
TGG
Pro
>WENV170229452
CEQG01121366
452565
Alphaproteobacteria
GAA
Phe
>WENV170228563
CEQG01021293
780486
Alphaproteobacteria
TCC
Gly
>WENV170228639
CEQG01027929
655225
Alphaproteobacteria
TTG
Gln
>WENV170229185
CEQG01084358
653534
Alphaproteobacteria
GCC
Gly
>WENV170229248
CEQG01093453
653534
Alphaproteobacteria
GCC
Gly
>WENV170229249
CEQG01093453
653534
Alphaproteobacteria
GCC
Gly
>WENV170229407
CEQG01115798
653534
Alphaproteobacteria
GCC
Gly
>WENV170229745
CEQG01153374
653534
Alphaproteobacteria
GCC
Gly
>WENV170229656
CEQG01145526
30553
Alphaproteobacteria
GGA
Ser
>WENV170229303
CEQG01100472
780331
Alphaproteobacteria
TCC
Gly
>WENV170229199
CEQG01086238
780331
Alphaproteobacteria
TCC
Gly
>WENV170228870
CEQG01048536
780331
Alphaproteobacteria
TCC
Gly
>WENV170228650
CEQG01028941
780331
Alphaproteobacteria
TCC
Gly
>WENV170229652
CEQG01144906
291540
Alphaproteobacteria
TGG
Pro
>WENV170229524
CEQG01128539
291540
Alphaproteobacteria
TGG
Pro
>WENV170229225
CEQG01091492
780260
Alphaproteobacteria
GCA
Cys
>WENV170228598
CEQG01023551
273155
Alphaproteobacteria
GTG
His
>WENV170228633
CEQG01027453
654960
Alphaproteobacteria
CTC
Glu
>WENV170228978
CEQG01059394
180423
Alphaproteobacteria
CAA
Leu
>WENV170228325
CEQG01001079
656156
Alphaproteobacteria
GCC
Gly
>WENV170229084
CEQG01073463
655301
Alphaproteobacteria
GGT
Thr
>WENV170229500
CEQG01124700
655270
Alphaproteobacteria
GAA
Phe
>WENV170228815
CEQG01044533
218119
Alphaproteobacteria
>WENV170229193
CEQG01085048
218119
Alphaproteobacteria
>WENV170228332
CEQG01002241
653538
Alphaproteobacteria
TTC
Glu
>WENV170229750
CEQG01153594
456410
Alphaproteobacteria
CGT
Thr
>WENV170229226
CEQG01091640
46035
Alphaproteobacteria
GGA
Ser
>WENV170229329
CEQG01105416
656063
Alphaproteobacteria
GAC
Val
>WENV170229592
CEQG01137446
659897
Alphaproteobacteria
GAC
Val
>WENV170229316
CEQG01103028
454623
Alphaproteobacteria
TAC
Val
>WENV170228802
CEQG01042763
281026
Alphaproteobacteria
CAT
Met
>WENV170228803
CEQG01042764
281026
Alphaproteobacteria
CAT
Met
>WENV170229310
CEQG01101968
281026
Alphaproteobacteria
CAT
Met
>WENV170229382
CEQG01113440
281026
Alphaproteobacteria
CAT
Met
>WENV170229411
CEQG01116318
47093
Alphaproteobacteria
CGA
Ser
>WENV170229019
CEQG01064539
656297
Alphaproteobacteria
TTG
Gln
>WENV170229129
CEQG01077336
656297
Alphaproteobacteria
TTG
Gln
>WENV170229036
CEQG01068054
468172
Alphaproteobacteria
TGC
Ala
>WENV170229241
CEQG01093044
455126
Alphaproteobacteria
TGC
Ala
>WENV170229325
CEQG01105183
482745
Alphaproteobacteria
TAC
Val
>WENV170229324
CEQG01105183
277700
Alphaproteobacteria
GTG
His
>WENV170228545
CEQG01018926
452895
Alphaproteobacteria
TGC
Ala
>WENV170228732
CEQG01035072
655359
Alphaproteobacteria
GAC
Val
>WENV170228622
CEQG01025983
655359
Alphaproteobacteria
GAC
Val
>WENV170229336
CEQG01106661
49736
Alphaproteobacteria
TGA
Ser
>WENV170228699
CEQG01032994
153953
Alphaproteobacteria
TAA
Leu
>WENV170229013
CEQG01064086
456891
Alphaproteobacteria
CGT
Thr
>WENV170229049
CEQG01069546
282775
Alphaproteobacteria
TCT
Arg
>WENV170228346
CEQG01003228
451742
Alphaproteobacteria
GGC
Ala
>WENV170229285
CEQG01098209
451742
Alphaproteobacteria
GGC
Ala
>WENV170229517
CEQG01127206
653532
Alphaproteobacteria
GTT
Asn
>WENV170229298
CEQG01100074
653532
Alphaproteobacteria
GTT
Asn
>WENV170229076
CEQG01072685
653532
Alphaproteobacteria
GTT
Asn
>WENV170229029
CEQG01066281
654987
Alphaproteobacteria
GAC
Val
>WENV170229444
CEQG01120153
19999
Alphaproteobacteria
GCT
Ser
>WENV170228992
CEQG01061024
673402
Alphaproteobacteria
TTG
Gln
>WENV170228763
CEQG01038706
457162
Alphaproteobacteria
TTT
Lys
>WENV170229010
CEQG01063789
273451
Alphaproteobacteria
GTG
His
>WENV170229350
CEQG01108290
455172
Alphaproteobacteria
GGC
Ala
>WENV170229214
CEQG01089062
455172
Alphaproteobacteria
GGC
Ala
>WENV170228457
CEQG01012952
455172
Alphaproteobacteria
GGC
Ala
>WENV170229415
CEQG01116887
655394
Alphaproteobacteria
GTT
Asn
>WENV170229114
CEQG01075545
276089
Alphaproteobacteria
CCG
Arg
>WENV170229156
CEQG01080532
273450
Alphaproteobacteria
TCT
Arg
>WENV170229748
CEQG01153484
788369
Alphaproteobacteria
CCC
Gly
>WENV170229689
CEQG01148915
273801
Alphaproteobacteria
GTG
His
>WENV170229368
CEQG01111169
779636
Alphaproteobacteria
CTG
Gln
>WENV170228814
CEQG01044263
47329
Alphaproteobacteria
TGA
Ser
>WENV170229055
CEQG01070574
655392
Alphaproteobacteria
GAC
Val
>WENV170229111
CEQG01075274
274223
Alphaproteobacteria
CCG
Arg
>WENV170228314
CEQG01000044
274138
Alphaproteobacteria
CAT
Met
>WENV170229578
CEQG01135245
451850
Alphaproteobacteria
TAC
Val
>WENV170228662
CEQG01029796
655358
Alphaproteobacteria
TTG
Gln
>WENV170228394
CEQG01007043
456892
Alphaproteobacteria
CGC
Ala
>WENV170228402
CEQG01007881
653931
Alphaproteobacteria
GTT
Asn
>WENV170228353
CEQG01003835
780327
Alphaproteobacteria
GCA
Cys
>WENV170228959
CEQG01056832
780327
Alphaproteobacteria
GCA
Cys
>WENV170228877
CEQG01048989
655166
Alphaproteobacteria
CAC
Val
>WENV170229526
CEQG01128603
655166
Alphaproteobacteria
CAC
Val
>WENV170228350
CEQG01003374
454512
Alphaproteobacteria
CCA
Trp
>WENV170228746
CEQG01037330
273803
Alphaproteobacteria
CCT
Arg
>WENV170229647
CEQG01144107
273803
Alphaproteobacteria
CCT
Arg
>WENV170229610
CEQG01139152
455360
Alphaproteobacteria
CGC
Ala
>WENV170228445
CEQG01012265
455360
Alphaproteobacteria
CGC
Ala
>WENV170228342
CEQG01002953
46222
Alphaproteobacteria
GGA
Ser
>WENV170229463
CEQG01122771
270796
Alphaproteobacteria
GTC
Asp
>WENV170229459
CEQG01122139
270796
Alphaproteobacteria
GTC
Asp
>WENV170229282
CEQG01097760
270796
Alphaproteobacteria
GTC
Asp
>WENV170229281
CEQG01097760
270796
Alphaproteobacteria
GTC
Asp
>WENV170228462
CEQG01013141
655361
Alphaproteobacteria
GCC
Gly
>WENV170228936
CEQG01054659
655361
Alphaproteobacteria
GCC
Gly
>WENV170228438
CEQG01011643
490965
Alphaproteobacteria
TGC
Ala
>WENV170228498
CEQG01016108
154064
Alphaproteobacteria
CAG
Leu
>WENV170229314
CEQG01102523
274141
Alphaproteobacteria
CCT
Arg
>WENV170229265
CEQG01095471
273603
Alphaproteobacteria
TGG
Pro
>WENV170229734
CEQG01152712
482793
Alphaproteobacteria
TTC
Glu
>WENV170229334
CEQG01106195
780346
Alphaproteobacteria
CTG
Gln
>WENV170229211
CEQG01088661
780346
Alphaproteobacteria
CTG
Gln
>WENV170228574
CEQG01022591
454504
Alphaproteobacteria
CAT
Met
>WENV170229275
CEQG01096803
452755
Alphaproteobacteria
TAC
Val
>WENV170228755
CEQG01038121
454912
Alphaproteobacteria
GGC
Ala
>WENV170228831
CEQG01046088
275560
Alphaproteobacteria
ACG
Arg
>WENV170228940
CEQG01054838
656140
Alphaproteobacteria
GAC
Val
>WENV170229143
CEQG01078756
20317
Alphaproteobacteria
GCT
Ser
>WENV170229108
CEQG01074935
663828
Alphaproteobacteria
TTC
Glu
>WENV170229376
CEQG01112498
671670
Alphaproteobacteria
CAC
Val
>WENV170228452
CEQG01012492
112429
Alphaproteobacteria
GAG
Leu
>WENV170228322
CEQG01000980
273907
Alphaproteobacteria
ACG
Arg
>WENV170228323
CEQG01000980
273907
Alphaproteobacteria
ACG
Arg
>WENV170229501
CEQG01124913
113889
Alphaproteobacteria
CAG
Leu
>WENV170229733
CEQG01152582
281027
Alphaproteobacteria
CCT
Arg
>WENV170229571
CEQG01134004
281027
Alphaproteobacteria
CCT
Arg
>WENV170229307
CEQG01101547
31090
Alphaproteobacteria
GGA
Ser
>WENV170228404
CEQG01008240
455995
Alphaproteobacteria
CCA
Trp
>WENV170228799
CEQG01042231
454914
Alphaproteobacteria
TTT
Lys
>WENV170229649
CEQG01144618
454914
Alphaproteobacteria
TTT
Lys
>WENV170228367
CEQG01004947
46034
Alphaproteobacteria
CGA
Ser
>WENV170229471
CEQG01123752
281029
Alphaproteobacteria
GGG
Pro
>WENV170228744
CEQG01036906
281029
Alphaproteobacteria
GGG
Pro
>WENV170229573
CEQG01134466
654103
Alphaproteobacteria
GAA
Phe
>WENV170228451
CEQG01012395
780039
Alphaproteobacteria
GCA
Cys
>WENV170229147
CEQG01079397
780039
Alphaproteobacteria
GCA
Cys
>WENV170229591
CEQG01137053
275989
Alphaproteobacteria
CAT
Met
>WENV170229245
CEQG01093314
454433
Alphaproteobacteria
TGT
Thr
>WENV170228444
CEQG01012265
454433
Alphaproteobacteria
TGT
Thr
>WENV170229044
CEQG01068844
274130
Alphaproteobacteria
CGG
Pro
>WENV170228846
CEQG01046839
658005
Alphaproteobacteria
GCC
Gly
>WENV170229657
CEQG01145702
653539
Alphaproteobacteria
GAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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