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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
61 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170727353
LULE01000003
655167
Alphaproteobacteria
TTC
Glu
>WENV170728345
LULE01022240
273805
Alphaproteobacteria
ACG
Arg
>WENV170727345
LULE01000002
270792
Alphaproteobacteria
CAT
Met
>WENV170727402
LULE01000040
655225
Alphaproteobacteria
TTG
Gln
>WENV170727475
LULE01000152
455173
Alphaproteobacteria
GAA
Phe
>WENV170727339
LULE01000002
653534
Alphaproteobacteria
GCC
Gly
>WENV170727340
LULE01000002
653534
Alphaproteobacteria
GCC
Gly
>WENV170727369
LULE01000006
45799
Alphaproteobacteria
GCT
Ser
>WENV170727404
LULE01000041
180542
Alphaproteobacteria
TAG
Leu
>WENV170727363
LULE01000004
30553
Alphaproteobacteria
GGA
Ser
>WENV170727388
LULE01000016
780260
Alphaproteobacteria
GCA
Cys
>WENV170728376
LULE01025322
218220
Alphaproteobacteria
>WENV170727452
LULE01000103
655301
Alphaproteobacteria
GGT
Thr
>WENV170727356
LULE01000003
656063
Alphaproteobacteria
GAC
Val
>WENV170727567
LULE01000494
45981
Alphaproteobacteria
TGA
Ser
>WENV170727313
LULE01000001
277664
Alphaproteobacteria
GTC
Asp
>WENV170727342
LULE01000002
219139
Alphaproteobacteria
TAG
Leu
>WENV170727311
LULE01000001
274224
Alphaproteobacteria
CAT
Met
>WENV170728407
LULE01028458
655359
Alphaproteobacteria
GAC
Val
>WENV170727378
LULE01000009
275153
Alphaproteobacteria
CGG
Pro
>WENV170727341
LULE01000002
297572
Alphaproteobacteria
GTG
His
>WENV170727460
LULE01000123
452894
Alphaproteobacteria
CCA
Trp
>WENV170727813
LULE01002627
452894
Alphaproteobacteria
CCA
Trp
>WENV170728234
LULE01014349
452894
Alphaproteobacteria
CCA
Trp
>WENV170727346
LULE01000002
653532
Alphaproteobacteria
GTT
Asn
>WENV170727373
LULE01000007
655363
Alphaproteobacteria
GGT
Thr
>WENV170727403
LULE01000041
780299
Alphaproteobacteria
TCC
Gly
>WENV170727393
LULE01000020
274039
Alphaproteobacteria
CAT
Met
>WENV170727317
LULE01000001
455172
Alphaproteobacteria
GGC
Ala
>WENV170727435
LULE01000083
455172
Alphaproteobacteria
GGC
Ala
>WENV170727940
LULE01004865
301178
Alphaproteobacteria
GTG
His
>WENV170728324
LULE01020162
655566
Alphaproteobacteria
GAC
Val
>WENV170727333
LULE01000002
274223
Alphaproteobacteria
CCG
Arg
>WENV170727372
LULE01000006
113188
Alphaproteobacteria
GAG
Leu
>WENV170727392
LULE01000019
655300
Alphaproteobacteria
GTT
Asn
>WENV170728292
LULE01018067
780327
Alphaproteobacteria
GCA
Cys
>WENV170728333
LULE01020872
655166
Alphaproteobacteria
CAC
Val
>WENV170727382
LULE01000012
454512
Alphaproteobacteria
CCA
Trp
>WENV170727379
LULE01000010
454056
Alphaproteobacteria
CGT
Thr
>WENV170727308
LULE01000001
455360
Alphaproteobacteria
CGC
Ala
>WENV170727336
LULE01000002
270796
Alphaproteobacteria
GTC
Asp
>WENV170727337
LULE01000002
270796
Alphaproteobacteria
GTC
Asp
>WENV170727386
LULE01000012
655361
Alphaproteobacteria
GCC
Gly
>WENV170728163
LULE01011365
654681
Alphaproteobacteria
GCC
Gly
>WENV170728133
LULE01010044
655271
Alphaproteobacteria
GGT
Thr
>WENV170728270
LULE01016474
455436
Alphaproteobacteria
TTC
Glu
>WENV170727315
LULE01000001
454504
Alphaproteobacteria
CAT
Met
>WENV170727351
LULE01000003
275560
Alphaproteobacteria
ACG
Arg
>WENV170728011
LULE01006731
656140
Alphaproteobacteria
GAC
Val
>WENV170727550
LULE01000413
455171
Alphaproteobacteria
CGT
Thr
>WENV170727334
LULE01000002
671670
Alphaproteobacteria
CAC
Val
>WENV170727413
LULE01000048
273907
Alphaproteobacteria
ACG
Arg
>WENV170728055
LULE01007652
780582
Alphaproteobacteria
TCC
Gly
>WENV170727318
LULE01000001
281027
Alphaproteobacteria
CCT
Arg
>WENV170727701
LULE01001370
654791
Alphaproteobacteria
CTC
Glu
>WENV170727394
LULE01000022
780298
Alphaproteobacteria
CTG
Gln
>WENV170727380
LULE01000010
454914
Alphaproteobacteria
TTT
Lys
>WENV170727414
LULE01000048
180543
Alphaproteobacteria
CAA
Leu
>WENV170727370
LULE01000006
654103
Alphaproteobacteria
GAA
Phe
>WENV170727396
LULE01000024
780039
Alphaproteobacteria
GCA
Cys
>WENV170727850
LULE01003121
304024
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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