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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170645945
JQGF01001469
59151
Betaproteobacteria
GTA
Tyr
>WENV170645906
JQGF01000185
412213
Betaproteobacteria
CCC
Gly
>WENV170646028
JQGF01011117
339575
Betaproteobacteria
CAC
Val
>WENV170645959
JQGF01002103
147018
Betaproteobacteria
TCT
Arg
>WENV170646060
JQGF01020728
147018
Betaproteobacteria
TCT
Arg
>WENV170646061
JQGF01020729
147018
Betaproteobacteria
TCT
Arg
>WENV170645929
JQGF01001034
237683
Betaproteobacteria
CTT
Lys
>WENV170645936
JQGF01001184
339576
Betaproteobacteria
CCT
Arg
>WENV170646006
JQGF01006165
339576
Betaproteobacteria
CCT
Arg
>WENV170645964
JQGF01002352
267870
Betaproteobacteria
TTC
Glu
>WENV170645967
JQGF01002352
267870
Betaproteobacteria
TTC
Glu
>WENV170645990
JQGF01003910
267870
Betaproteobacteria
TTC
Glu
>WENV170645976
JQGF01002816
237682
Betaproteobacteria
CGT
Thr
>WENV170645920
JQGF01000587
17915
Betaproteobacteria
GGA
Ser
>WENV170645969
JQGF01002412
339574
Betaproteobacteria
CCG
Arg
>WENV170646043
JQGF01014433
270881
Betaproteobacteria
TGT
Thr
>WENV170646014
JQGF01006587
23642
Betaproteobacteria
TGA
Ser
>WENV170646030
JQGF01011307
23642
Betaproteobacteria
TGA
Ser
>WENV170645931
JQGF01001149
237684
Betaproteobacteria
TGT
Thr
>WENV170646001
JQGF01005698
237684
Betaproteobacteria
TGT
Thr
>WENV170646015
JQGF01006587
80881
Betaproteobacteria
TAA
Leu
>WENV170646031
JQGF01011307
80881
Betaproteobacteria
TAA
Leu
>WENV170645983
JQGF01003217
412212
Betaproteobacteria
GCA
Cys
>WENV170646052
JQGF01015555
412212
Betaproteobacteria
GCA
Cys
>WENV170646018
JQGF01007557
6969
Betaproteobacteria
GCT
Ser
>WENV170645907
JQGF01000310
109389
Betaproteobacteria
TAG
Leu
>WENV170645960
JQGF01002274
99533
Betaproteobacteria
CAG
Leu
>WENV170645961
JQGF01002276
99533
Betaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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