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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
130 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170898396
MDTD01125295
349303
Alphaproteobacteria
GCC
Gly
>WENV170901582
MDTD01172558
381459
Alphaproteobacteria
CAC
Val
>WENV170890390
MDTD01009008
237493
Alphaproteobacteria
CCA
Trp
>WENV170896397
MDTD01094878
339737
Alphaproteobacteria
GAC
Val
>WENV170896891
MDTD01102650
339737
Alphaproteobacteria
GAC
Val
>WENV170902270
MDTD01182516
419488
Alphaproteobacteria
TCC
Gly
>WENV170900119
MDTD01149412
351461
Alphaproteobacteria
TTG
Gln
>WENV170893387
MDTD01051056
99726
Alphaproteobacteria
TAG
Leu
>WENV170901057
MDTD01164015
306070
Alphaproteobacteria
CCA
Trp
>WENV170897534
MDTD01113012
147089
Alphaproteobacteria
ACG
Arg
>WENV170898293
MDTD01123627
147089
Alphaproteobacteria
ACG
Arg
>WENV170900942
MDTD01162121
147089
Alphaproteobacteria
ACG
Arg
>WENV170901710
MDTD01174853
147089
Alphaproteobacteria
ACG
Arg
>WENV170897809
MDTD01117491
10665
Alphaproteobacteria
GCT
Ser
>WENV170901657
MDTD01174025
10665
Alphaproteobacteria
GCT
Ser
>WENV170894667
MDTD01068956
193550
Alphaproteobacteria
TCT
Arg
>WENV170897966
MDTD01119145
395846
Alphaproteobacteria
GAC
Val
>WENV170899948
MDTD01147271
109657
Alphaproteobacteria
TAG
Leu
>WENV170895272
MDTD01077213
238045
Alphaproteobacteria
TTC
Glu
>WENV170897035
MDTD01105106
257573
Alphaproteobacteria
GAA
Phe
>WENV170901676
MDTD01174377
257573
Alphaproteobacteria
GAA
Phe
>WENV170901784
MDTD01175861
257573
Alphaproteobacteria
GAA
Phe
>WENV170901850
MDTD01176706
257573
Alphaproteobacteria
GAA
Phe
>WENV170891652
MDTD01027161
176908
Alphaproteobacteria
GTC
Asp
>WENV170894845
MDTD01071619
176908
Alphaproteobacteria
GTC
Asp
>WENV170899867
MDTD01146192
176908
Alphaproteobacteria
GTC
Asp
>WENV170900115
MDTD01149412
199776
Alphaproteobacteria
CGG
Pro
>WENV170902980
MDTD01194776
282595
Alphaproteobacteria
CCA
Trp
>WENV170896680
MDTD01099311
339724
Alphaproteobacteria
TTG
Gln
>WENV170903275
MDTD01199140
435528
Alphaproteobacteria
GCA
Cys
>WENV170895309
MDTD01077550
421153
Alphaproteobacteria
>WENV170897335
MDTD01109992
421153
Alphaproteobacteria
>WENV170901128
MDTD01165338
165266
Alphaproteobacteria
CAT
Met
>WENV170903057
MDTD01196049
190043
Alphaproteobacteria
CAT
Met
>WENV170890573
MDTD01012084
338282
Alphaproteobacteria
GTT
Asn
>WENV170891019
MDTD01018026
338282
Alphaproteobacteria
GTT
Asn
>WENV170891042
MDTD01018331
338282
Alphaproteobacteria
GTT
Asn
>WENV170891440
MDTD01023980
338282
Alphaproteobacteria
GTT
Asn
>WENV170901171
MDTD01165965
338282
Alphaproteobacteria
GTT
Asn
>WENV170901251
MDTD01167403
338282
Alphaproteobacteria
GTT
Asn
>WENV170901817
MDTD01176257
147577
Alphaproteobacteria
CCG
Arg
>WENV170903438
MDTD01201890
199865
Alphaproteobacteria
CAT
Met
>WENV170892842
MDTD01043399
95928
Alphaproteobacteria
TAG
Leu
>WENV170890601
MDTD01012840
239035
Alphaproteobacteria
CGC
Ala
>WENV170902130
MDTD01180420
162801
Alphaproteobacteria
GTG
His
>WENV170898528
MDTD01127486
127451
Alphaproteobacteria
GGG
Pro
>WENV170892910
MDTD01044820
200119
Alphaproteobacteria
CAT
Met
>WENV170893110
MDTD01047938
200119
Alphaproteobacteria
CAT
Met
>WENV170903345
MDTD01200165
200119
Alphaproteobacteria
CAT
Met
>WENV170894472
MDTD01066132
77433
Alphaproteobacteria
CAG
Leu
>WENV170893231
MDTD01049705
339846
Alphaproteobacteria
GAC
Val
>WENV170893103
MDTD01047733
339290
Alphaproteobacteria
GGT
Thr
>WENV170897397
MDTD01111044
147879
Alphaproteobacteria
TGG
Pro
>WENV170901959
MDTD01178506
419996
Alphaproteobacteria
GCA
Cys
>WENV170901788
MDTD01175906
339722
Alphaproteobacteria
TTG
Gln
>WENV170893071
MDTD01047163
339490
Alphaproteobacteria
GAC
Val
>WENV170898880
MDTD01132334
235492
Alphaproteobacteria
GAA
Phe
>WENV170903101
MDTD01196526
235492
Alphaproteobacteria
GAA
Phe
>WENV170891241
MDTD01021253
157999
Alphaproteobacteria
TCT
Arg
>WENV170894613
MDTD01068217
235496
Alphaproteobacteria
TAC
Val
>WENV170900567
MDTD01156203
235496
Alphaproteobacteria
TAC
Val
>WENV170900400
MDTD01153956
194755
Alphaproteobacteria
CAT
Met
>WENV170897972
MDTD01119273
319584
Alphaproteobacteria
CGC
Ala
>WENV170889996
MDTD01003482
147361
Alphaproteobacteria
GGG
Pro
>WENV170891281
MDTD01021887
147361
Alphaproteobacteria
GGG
Pro
>WENV170902107
MDTD01180063
146929
Alphaproteobacteria
CCG
Arg
>WENV170892572
MDTD01039745
339750
Alphaproteobacteria
GGT
Thr
>WENV170902326
MDTD01183321
339750
Alphaproteobacteria
GGT
Thr
>WENV170893389
MDTD01051056
192195
Alphaproteobacteria
GTC
Asp
>WENV170893396
MDTD01051123
192195
Alphaproteobacteria
GTC
Asp
>WENV170896614
MDTD01098326
192195
Alphaproteobacteria
GTC
Asp
>WENV170900308
MDTD01152376
192195
Alphaproteobacteria
GTC
Asp
>WENV170901838
MDTD01176525
192195
Alphaproteobacteria
GTC
Asp
>WENV170902095
MDTD01179885
192195
Alphaproteobacteria
GTC
Asp
>WENV170902528
MDTD01186831
192195
Alphaproteobacteria
GTC
Asp
>WENV170902772
MDTD01191158
192195
Alphaproteobacteria
GTC
Asp
>WENV170891992
MDTD01032302
319095
Alphaproteobacteria
TAC
Val
>WENV170903227
MDTD01198459
151730
Alphaproteobacteria
CCG
Arg
>WENV170896312
MDTD01093717
341307
Alphaproteobacteria
GTT
Asn
>WENV170902448
MDTD01185305
341307
Alphaproteobacteria
GTT
Asn
>WENV170894272
MDTD01063170
258175
Alphaproteobacteria
CGC
Ala
>WENV170894398
MDTD01064890
167926
Alphaproteobacteria
CAT
Met
>WENV170892750
MDTD01042393
254522
Alphaproteobacteria
GAA
Phe
>WENV170897672
MDTD01115623
254522
Alphaproteobacteria
GAA
Phe
>WENV170897896
MDTD01118454
254522
Alphaproteobacteria
GAA
Phe
>WENV170893136
MDTD01048349
59164
Alphaproteobacteria
GAG
Leu
>WENV170898564
MDTD01127887
59164
Alphaproteobacteria
GAG
Leu
>WENV170895634
MDTD01082261
254387
Alphaproteobacteria
TTT
Lys
>WENV170899312
MDTD01137739
163860
Alphaproteobacteria
GGG
Pro
>WENV170896593
MDTD01098090
147085
Alphaproteobacteria
CCG
Arg
>WENV170895501
MDTD01080285
338760
Alphaproteobacteria
GAA
Phe
>WENV170902568
MDTD01187414
237196
Alphaproteobacteria
CGT
Thr
>WENV170900116
MDTD01149412
352191
Alphaproteobacteria
GGT
Thr
>WENV170893784
MDTD01056385
147087
Alphaproteobacteria
GTG
His
>WENV170890753
MDTD01014451
319925
Alphaproteobacteria
TGT
Thr
>WENV170894104
MDTD01060947
319925
Alphaproteobacteria
TGT
Thr
>WENV170895324
MDTD01077686
319925
Alphaproteobacteria
TGT
Thr
>WENV170895447
MDTD01079451
319925
Alphaproteobacteria
TGT
Thr
>WENV170895988
MDTD01088330
319925
Alphaproteobacteria
TGT
Thr
>WENV170899430
MDTD01139656
266073
Alphaproteobacteria
TTT
Lys
>WENV170890036
MDTD01003980
369678
Alphaproteobacteria
GGT
Thr
>WENV170892417
MDTD01038031
369678
Alphaproteobacteria
GGT
Thr
>WENV170902679
MDTD01189594
369678
Alphaproteobacteria
GGT
Thr
>WENV170896000
MDTD01088501
150194
Alphaproteobacteria
TCT
Arg
>WENV170902431
MDTD01185144
150194
Alphaproteobacteria
TCT
Arg
>WENV170895202
MDTD01076236
30071
Alphaproteobacteria
CGA
Ser
>WENV170896594
MDTD01098090
339606
Alphaproteobacteria
>WENV170894568
MDTD01067520
154227
Alphaproteobacteria
CAT
Met
>WENV170890184
MDTD01006077
412424
Alphaproteobacteria
TCC
Gly
>WENV170890570
MDTD01012033
412424
Alphaproteobacteria
TCC
Gly
>WENV170896031
MDTD01089053
412424
Alphaproteobacteria
TCC
Gly
>WENV170896173
MDTD01091233
412424
Alphaproteobacteria
TCC
Gly
>WENV170897010
MDTD01104573
412424
Alphaproteobacteria
TCC
Gly
>WENV170891994
MDTD01032331
150356
Alphaproteobacteria
GTC
Asp
>WENV170894423
MDTD01065298
150356
Alphaproteobacteria
GTC
Asp
>WENV170902884
MDTD01192976
150356
Alphaproteobacteria
GTC
Asp
>WENV170891153
MDTD01020017
147289
Alphaproteobacteria
GTC
Asp
>WENV170894376
MDTD01064506
147289
Alphaproteobacteria
GTC
Asp
>WENV170900892
MDTD01161217
21074
Alphaproteobacteria
GGA
Ser
>WENV170897226
MDTD01107937
114040
Alphaproteobacteria
CAA
Leu
>WENV170900307
MDTD01152376
289664
Alphaproteobacteria
TAC
Val
>WENV170892781
MDTD01042708
430481
Alphaproteobacteria
GCA
Cys
>WENV170893117
MDTD01048001
377327
Alphaproteobacteria
GCC
Gly
>WENV170893212
MDTD01049402
377327
Alphaproteobacteria
GCC
Gly
>WENV170902538
MDTD01187085
377327
Alphaproteobacteria
GCC
Gly
>WENV170890512
MDTD01011041
191695
Alphaproteobacteria
CCT
Arg
>WENV170892202
MDTD01035212
388882
Alphaproteobacteria
GCC
Gly
>WENV170892909
MDTD01044808
388882
Alphaproteobacteria
GCC
Gly
>WENV170893470
MDTD01052161
343498
Alphaproteobacteria
GGT
Thr
>WENV170890602
MDTD01012840
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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