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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180639616
OCRL01000041
237201
Alphaproteobacteria
CAT
Met
>WENV180640054
OCRL01000382
254525
Alphaproteobacteria
CCT
Arg
>WENV180639692
OCRL01000072
339325
Alphaproteobacteria
CAC
Val
>WENV180639418
OCRL01000002
350557
Alphaproteobacteria
TTT
Lys
>WENV180639421
OCRL01000002
31286
Alphaproteobacteria
GGA
Ser
>WENV180639423
OCRL01000002
435528
Alphaproteobacteria
GCA
Cys
>WENV180639413
OCRL01000002
338282
Alphaproteobacteria
GTT
Asn
>WENV180639411
OCRL01000002
350556
Alphaproteobacteria
TGT
Thr
>WENV180640068
OCRL01000419
23560
Alphaproteobacteria
CGA
Ser
>WENV180639609
OCRL01000038
145688
Alphaproteobacteria
TCT
Arg
>WENV180639626
OCRL01000045
296875
Alphaproteobacteria
CGC
Ala
>WENV180639542
OCRL01000025
286119
Alphaproteobacteria
GGC
Ala
>WENV180639540
OCRL01000025
338289
Alphaproteobacteria
GAC
Val
>WENV180639691
OCRL01000072
114625
Alphaproteobacteria
CAA
Leu
>WENV180639415
OCRL01000002
151730
Alphaproteobacteria
CCG
Arg
>WENV180639422
OCRL01000002
99048
Alphaproteobacteria
TAG
Leu
>WENV180639615
OCRL01000041
114626
Alphaproteobacteria
TAA
Leu
>WENV180639613
OCRL01000041
235427
Alphaproteobacteria
CCA
Trp
>WENV180639414
OCRL01000002
339884
Alphaproteobacteria
TTC
Glu
>WENV180639605
OCRL01000038
339884
Alphaproteobacteria
TTC
Glu
>WENV180639580
OCRL01000033
130084
Alphaproteobacteria
GGG
Pro
>WENV180639614
OCRL01000041
59164
Alphaproteobacteria
GAG
Leu
>WENV180639607
OCRL01000038
113673
Alphaproteobacteria
>WENV180639725
OCRL01000085
237196
Alphaproteobacteria
CGT
Thr
>WENV180639417
OCRL01000002
146626
Alphaproteobacteria
GTG
His
>WENV180639628
OCRL01000047
427621
Alphaproteobacteria
TCC
Gly
>WENV180639706
OCRL01000078
254524
Alphaproteobacteria
TAC
Val
>WENV180639724
OCRL01000085
23743
Alphaproteobacteria
GCT
Ser
>WENV180639541
OCRL01000025
184904
Alphaproteobacteria
ACG
Arg
>WENV180639625
OCRL01000045
25738
Alphaproteobacteria
TGA
Ser
>WENV180639627
OCRL01000045
174372
Alphaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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