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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
171 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180921219
ODTJ01000002
267632
Actinomycetota
GTT
Asn
>WENV180922608
ODTJ01006818
267632
Actinomycetota
GTT
Asn
>WENV180921494
ODTJ01000077
235615
Actinomycetota
TGC
Ala
>WENV180922377
ODTJ01003301
235615
Actinomycetota
TGC
Ala
>WENV180922698
ODTJ01008615
38355
Actinomycetota
GAG
Leu
>WENV180922308
ODTJ01002558
413566
Actinomycetota
CCC
Gly
>WENV180922525
ODTJ01005296
413566
Actinomycetota
CCC
Gly
>WENV180922976
ODTJ01025111
413566
Actinomycetota
CCC
Gly
>WENV180922977
ODTJ01025432
413566
Actinomycetota
CCC
Gly
>WENV180923030
ODTJ01032605
413566
Actinomycetota
CCC
Gly
>WENV180923141
ODTJ01050147
413566
Actinomycetota
CCC
Gly
>WENV180923231
ODTJ01076354
413566
Actinomycetota
CCC
Gly
>WENV180921893
ODTJ01000621
240126
Actinomycetota
GTG
His
>WENV180922258
ODTJ01002162
240126
Actinomycetota
GTG
His
>WENV180923029
ODTJ01032579
240126
Actinomycetota
GTG
His
>WENV180923149
ODTJ01054299
240126
Actinomycetota
GTG
His
>WENV180922259
ODTJ01002167
345178
Actinomycetota
CTG
Gln
>WENV180921365
ODTJ01000030
235606
Actinomycetota
GGT
Thr
>WENV180922212
ODTJ01001900
235606
Actinomycetota
GGT
Thr
>WENV180922426
ODTJ01003887
246840
Actinomycetota
CAC
Val
>WENV180922560
ODTJ01006008
246840
Actinomycetota
CAC
Val
>WENV180922567
ODTJ01006155
246840
Actinomycetota
CAC
Val
>WENV180922632
ODTJ01007095
246840
Actinomycetota
CAC
Val
>WENV180923403
ODTJ01172151
246840
Actinomycetota
CAC
Val
>WENV180922347
ODTJ01002920
361079
Actinomycetota
CTG
Gln
>WENV180922741
ODTJ01009734
361079
Actinomycetota
CTG
Gln
>WENV180923220
ODTJ01071493
361079
Actinomycetota
CTG
Gln
>WENV180923252
ODTJ01085871
361079
Actinomycetota
CTG
Gln
>WENV180922915
ODTJ01018537
340959
Actinomycetota
GTT
Asn
>WENV180922916
ODTJ01018555
340959
Actinomycetota
GTT
Asn
>WENV180923007
ODTJ01029285
340959
Actinomycetota
GTT
Asn
>WENV180922428
ODTJ01003912
259184
Actinomycetota
GTG
His
>WENV180922722
ODTJ01009289
158373
Actinomycetota
GGG
Pro
>WENV180922812
ODTJ01012295
158373
Actinomycetota
GGG
Pro
>WENV180922901
ODTJ01017055
158373
Actinomycetota
GGG
Pro
>WENV180923438
ODTJ01181043
158373
Actinomycetota
GGG
Pro
>WENV180921942
ODTJ01000758
149272
Actinomycetota
TTT
Lys
>WENV180922954
ODTJ01022687
149272
Actinomycetota
TTT
Lys
>WENV180923446
ODTJ01181380
149272
Actinomycetota
TTT
Lys
>WENV180921270
ODTJ01000012
418439
Actinomycetota
TCC
Gly
>WENV180922498
ODTJ01004886
235734
Actinomycetota
>WENV180921210
ODTJ01000002
145272
Actinomycetota
CAT
Met
>WENV180921720
ODTJ01000298
96367
Actinomycetota
GTA
Tyr
>WENV180921288
ODTJ01000015
341846
Actinomycetota
TCC
Gly
>WENV180922123
ODTJ01001452
341846
Actinomycetota
TCC
Gly
>WENV180922183
ODTJ01001732
84037
Actinomycetota
CAG
Leu
>WENV180921239
ODTJ01000006
235610
Actinomycetota
TGT
Thr
>WENV180922562
ODTJ01006008
412871
Actinomycetota
GCA
Cys
>WENV180921218
ODTJ01000002
338389
Actinomycetota
CAC
Val
>WENV180922319
ODTJ01002615
338389
Actinomycetota
CAC
Val
>WENV180921240
ODTJ01000006
235663
Actinomycetota
TTT
Lys
>WENV180922661
ODTJ01007776
240122
Actinomycetota
TGT
Thr
>WENV180921493
ODTJ01000077
145052
Actinomycetota
GAT
Ile
>WENV180921443
ODTJ01000058
241627
Actinomycetota
>WENV180921366
ODTJ01000030
338474
Actinomycetota
CAT
Met
>WENV180922614
ODTJ01006865
254819
Actinomycetota
CTC
Glu
>WENV180922726
ODTJ01009376
254819
Actinomycetota
CTC
Glu
>WENV180923272
ODTJ01095080
254819
Actinomycetota
CTC
Glu
>WENV180922500
ODTJ01004886
339641
Actinomycetota
GAC
Val
>WENV180922792
ODTJ01011533
246789
Actinomycetota
CCT
Arg
>WENV180922499
ODTJ01004886
411803
Actinomycetota
GCA
Cys
>WENV180921758
ODTJ01000372
16591
Actinomycetota
GAG
Leu
>WENV180922617
ODTJ01006882
16591
Actinomycetota
GAG
Leu
>WENV180922785
ODTJ01011472
16591
Actinomycetota
GAG
Leu
>WENV180922922
ODTJ01019215
16591
Actinomycetota
GAG
Leu
>WENV180923032
ODTJ01032647
16591
Actinomycetota
GAG
Leu
>WENV180922388
ODTJ01003374
415620
Actinomycetota
TCC
Gly
>WENV180921722
ODTJ01000298
149271
Actinomycetota
CAT
Met
>WENV180922386
ODTJ01003357
44930
Actinomycetota
GGA
Ser
>WENV180921263
ODTJ01000012
239204
Actinomycetota
CTT
Lys
>WENV180921264
ODTJ01000012
239204
Actinomycetota
CTT
Lys
>WENV180922987
ODTJ01026413
155366
Actinomycetota
GAA
Phe
>WENV180922604
ODTJ01006716
96366
Actinomycetota
TAG
Leu
>WENV180922081
ODTJ01001252
235662
Actinomycetota
TGT
Thr
>WENV180922429
ODTJ01003944
246807
Actinomycetota
TGC
Ala
>WENV180922845
ODTJ01013519
246791
Actinomycetota
TCT
Arg
>WENV180921291
ODTJ01000016
37093
Actinomycetota
GAG
Leu
>WENV180922855
ODTJ01014099
23975
Actinomycetota
GCT
Ser
>WENV180921367
ODTJ01000030
250703
Actinomycetota
CCA
Trp
>WENV180922985
ODTJ01026413
277211
Actinomycetota
TTC
Glu
>WENV180922794
ODTJ01011560
121559
Actinomycetota
>WENV180921596
ODTJ01000157
148467
Actinomycetota
CAT
Met
>WENV180922867
ODTJ01015117
246299
Actinomycetota
CTT
Lys
>WENV180921762
ODTJ01000378
411740
Actinomycetota
CCC
Gly
>WENV180922484
ODTJ01004668
411740
Actinomycetota
CCC
Gly
>WENV180921208
ODTJ01000001
235388
Actinomycetota
GTG
His
>WENV180921523
ODTJ01000098
148463
Actinomycetota
TAA
Leu
>WENV180921932
ODTJ01000748
363051
Actinomycetota
CTG
Gln
>WENV180921830
ODTJ01000496
246222
Actinomycetota
CCG
Arg
>WENV180922419
ODTJ01003742
246222
Actinomycetota
CCG
Arg
>WENV180923182
ODTJ01059263
246222
Actinomycetota
CCG
Arg
>WENV180921215
ODTJ01000002
411682
Actinomycetota
GCA
Cys
>WENV180923288
ODTJ01101276
260823
Actinomycetota
TGC
Ala
>WENV180923031
ODTJ01032641
37359
Actinomycetota
>WENV180923138
ODTJ01049977
37359
Actinomycetota
>WENV180923239
ODTJ01079993
37359
Actinomycetota
>WENV180922385
ODTJ01003356
284330
Actinomycetota
TTT
Lys
>WENV180923336
ODTJ01125769
149270
Actinomycetota
GTC
Asp
>WENV180921480
ODTJ01000070
45767
Actinomycetota
GGA
Ser
>WENV180922320
ODTJ01002620
152190
Actinomycetota
GAT
Ile
>WENV180922460
ODTJ01004349
152190
Actinomycetota
GAT
Ile
>WENV180922505
ODTJ01004967
152190
Actinomycetota
GAT
Ile
>WENV180923068
ODTJ01038048
280137
Actinomycetota
CTT
Lys
>WENV180923069
ODTJ01038048
280137
Actinomycetota
CTT
Lys
>WENV180923070
ODTJ01038048
280137
Actinomycetota
CTT
Lys
>WENV180922236
ODTJ01002031
240123
Actinomycetota
TAC
Val
>WENV180922470
ODTJ01004529
240123
Actinomycetota
TAC
Val
>WENV180922913
ODTJ01018170
240123
Actinomycetota
TAC
Val
>WENV180922137
ODTJ01001498
345027
Actinomycetota
GTT
Asn
>WENV180922611
ODTJ01006828
97617
Actinomycetota
GTA
Tyr
>WENV180922300
ODTJ01002462
48036
Actinomycetota
CGA
Ser
>WENV180922348
ODTJ01002920
240121
Actinomycetota
CTC
Glu
>WENV180922742
ODTJ01009734
240121
Actinomycetota
CTC
Glu
>WENV180922959
ODTJ01023232
240121
Actinomycetota
CTC
Glu
>WENV180923253
ODTJ01085871
240121
Actinomycetota
CTC
Glu
>WENV180923450
ODTJ01181540
240121
Actinomycetota
CTC
Glu
>WENV180921428
ODTJ01000051
248046
Actinomycetota
CCA
Trp
>WENV180921284
ODTJ01000015
287977
Actinomycetota
GTG
His
>WENV180923022
ODTJ01030911
149269
Actinomycetota
TGG
Pro
>WENV180921842
ODTJ01000508
11157
Actinomycetota
GCT
Ser
>WENV180921495
ODTJ01000077
58781
Actinomycetota
CAG
Leu
>WENV180922293
ODTJ01002316
340958
Actinomycetota
TTG
Gln
>WENV180922095
ODTJ01001324
235613
Actinomycetota
GAA
Phe
>WENV180922762
ODTJ01010501
145085
Actinomycetota
CAA
Leu
>WENV180921444
ODTJ01000058
145085
Actinomycetota
CAA
Leu
>WENV180922387
ODTJ01003364
246806
Actinomycetota
TGT
Thr
>WENV180921204
ODTJ01000001
293092
Actinomycetota
CTC
Glu
>WENV180921267
ODTJ01000012
293092
Actinomycetota
CTC
Glu
>WENV180921969
ODTJ01000889
59716
Actinomycetota
CAG
Leu
>WENV180922665
ODTJ01007850
59716
Actinomycetota
CAG
Leu
>WENV180923014
ODTJ01029897
59716
Actinomycetota
CAG
Leu
>WENV180921285
ODTJ01000015
241612
Actinomycetota
CTT
Lys
>WENV180922213
ODTJ01001900
340329
Actinomycetota
CAT
Met
>WENV180922497
ODTJ01004886
345177
Actinomycetota
CAC
Val
>WENV180921363
ODTJ01000030
280065
Actinomycetota
CGT
Thr
>WENV180921211
ODTJ01000002
243424
Actinomycetota
TAC
Val
>WENV180921344
ODTJ01000027
235603
Actinomycetota
CCG
Arg
>WENV180922843
ODTJ01013454
37358
Actinomycetota
TGA
Ser
>WENV180922914
ODTJ01018369
37358
Actinomycetota
TGA
Ser
>WENV180922960
ODTJ01023327
37358
Actinomycetota
TGA
Ser
>WENV180922626
ODTJ01007032
240124
Actinomycetota
CGT
Thr
>WENV180922709
ODTJ01009019
240124
Actinomycetota
CGT
Thr
>WENV180922983
ODTJ01026228
3306
Actinomycetota
TAT
Ile
>WENV180923023
ODTJ01030952
3306
Actinomycetota
TAT
Ile
>WENV180923072
ODTJ01038293
3306
Actinomycetota
TAT
Ile
>WENV180923082
ODTJ01039717
3306
Actinomycetota
TAT
Ile
>WENV180922053
ODTJ01001136
96368
Actinomycetota
TAA
Leu
>WENV180923073
ODTJ01038293
96368
Actinomycetota
TAA
Leu
>WENV180922321
ODTJ01002620
250746
Actinomycetota
TGC
Ala
>WENV180922729
ODTJ01009408
235604
Actinomycetota
CCT
Arg
>WENV180921902
ODTJ01000657
236216
Actinomycetota
GGC
Ala
>WENV180923080
ODTJ01039010
236216
Actinomycetota
GGC
Ala
>WENV180923401
ODTJ01171732
236216
Actinomycetota
GGC
Ala
>WENV180923444
ODTJ01181376
236216
Actinomycetota
GGC
Ala
>WENV180922615
ODTJ01006868
235768
Actinomycetota
CGT
Thr
>WENV180922974
ODTJ01024941
345176
Actinomycetota
CCG
Arg
>WENV180922613
ODTJ01006865
345416
Actinomycetota
CTG
Gln
>WENV180923271
ODTJ01095080
345416
Actinomycetota
CTG
Gln
>WENV180922981
ODTJ01025974
154637
Actinomycetota
CAA
Leu
>WENV180921933
ODTJ01000748
285954
Actinomycetota
>WENV180921934
ODTJ01000748
285954
Actinomycetota
>WENV180922295
ODTJ01002416
235614
Actinomycetota
TAC
Val
>WENV180922621
ODTJ01006963
235612
Actinomycetota
TTC
Glu
>WENV180922824
ODTJ01012744
246800
Actinomycetota
CAT
Met
>WENV180922555
ODTJ01005844
412870
Actinomycetota
TCC
Gly
>WENV180923021
ODTJ01030911
412870
Actinomycetota
TCC
Gly
>WENV180921362
ODTJ01000030
16836
Actinomycetota
CGA
Ser
>WENV180922504
ODTJ01004962
261571
Actinomycetota
GTT
Asn
>WENV180921442
ODTJ01000058
338388
Actinomycetota
CTG
Gln
>WENV180923267
ODTJ01092454
350753
Actinomycetota
TTG
Gln
>WENV180922609
ODTJ01006818
155350
Actinomycetota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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