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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181405272
OGCD01000002
127050
Alphaproteobacteria
ACG
Arg
>WENV181405274
OGCD01000008
45173
Alphaproteobacteria
CAG
Leu
>WENV181405329
OGCD01001196
238022
Alphaproteobacteria
GGT
Thr
>WENV181405322
OGCD01000566
349707
Alphaproteobacteria
TCC
Gly
>WENV181405275
OGCD01000008
80925
Alphaproteobacteria
CAA
Leu
>WENV181405288
OGCD01000041
147345
Alphaproteobacteria
CCG
Arg
>WENV181405279
OGCD01000014
238017
Alphaproteobacteria
GAA
Phe
>WENV181405283
OGCD01000028
350817
Alphaproteobacteria
CAT
Met
>WENV181405273
OGCD01000003
368349
Alphaproteobacteria
GTT
Asn
>WENV181405305
OGCD01000323
339744
Alphaproteobacteria
TTG
Gln
>WENV181405293
OGCD01000070
161588
Alphaproteobacteria
CAT
Met
>WENV181405289
OGCD01000041
238015
Alphaproteobacteria
TAC
Val
>WENV181405281
OGCD01000015
238020
Alphaproteobacteria
GAC
Val
>WENV181405291
OGCD01000051
238019
Alphaproteobacteria
GTG
His
>WENV181405278
OGCD01000014
147344
Alphaproteobacteria
GTC
Asp
>WENV181405271
OGCD01000002
339745
Alphaproteobacteria
TTC
Glu
>WENV181405295
OGCD01000134
238013
Alphaproteobacteria
TGC
Ala
>WENV181405277
OGCD01000013
339743
Alphaproteobacteria
GCA
Cys
>WENV181405321
OGCD01000566
98868
Alphaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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