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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183741098
PJUF01040850
59151
Betaproteobacteria
GTA
Tyr
>WENV183740849
PJUF01013434
149229
Betaproteobacteria
TCT
Arg
>WENV183740975
PJUF01023348
149229
Betaproteobacteria
TCT
Arg
>WENV183741217
PJUF01058806
339575
Betaproteobacteria
CAC
Val
>WENV183740422
PJUF01001928
112442
Betaproteobacteria
GAG
Leu
>WENV183741282
PJUF01073822
112442
Betaproteobacteria
GAG
Leu
>WENV183740427
PJUF01002019
146768
Betaproteobacteria
CAT
Met
>WENV183740428
PJUF01002019
146768
Betaproteobacteria
CAT
Met
>WENV183740215
PJUF01000728
267870
Betaproteobacteria
TTC
Glu
>WENV183741161
PJUF01048637
267870
Betaproteobacteria
TTC
Glu
>WENV183741085
PJUF01038626
237682
Betaproteobacteria
CGT
Thr
>WENV183741209
PJUF01056765
237682
Betaproteobacteria
CGT
Thr
>WENV183740735
PJUF01007997
340345
Betaproteobacteria
CCT
Arg
>WENV183741016
PJUF01028153
340345
Betaproteobacteria
CCT
Arg
>WENV183740705
PJUF01007144
147332
Betaproteobacteria
CAT
Met
>WENV183740631
PJUF01004750
145695
Betaproteobacteria
GGG
Pro
>WENV183740509
PJUF01002927
17915
Betaproteobacteria
GGA
Ser
>WENV183740274
PJUF01000946
253695
Betaproteobacteria
TTT
Lys
>WENV183741133
PJUF01044941
238587
Betaproteobacteria
TAC
Val
>WENV183741206
PJUF01056428
292518
Betaproteobacteria
TTT
Lys
>WENV183741124
PJUF01043505
146726
Betaproteobacteria
TCT
Arg
>WENV183740625
PJUF01004607
313750
Betaproteobacteria
TAC
Val
>WENV183740463
PJUF01002389
147855
Betaproteobacteria
TTG
Gln
>WENV183741185
PJUF01052626
412212
Betaproteobacteria
GCA
Cys
>WENV183740982
PJUF01023829
193916
Betaproteobacteria
TTG
Gln
>WENV183741266
PJUF01071079
193916
Betaproteobacteria
TTG
Gln
>WENV183740349
PJUF01001309
253278
Betaproteobacteria
TTT
Lys
>WENV183740443
PJUF01002222
253278
Betaproteobacteria
TTT
Lys
>WENV183740530
PJUF01003135
253278
Betaproteobacteria
TTT
Lys
>WENV183740493
PJUF01002706
161511
Betaproteobacteria
TCT
Arg
>WENV183740614
PJUF01004516
304536
Betaproteobacteria
TGT
Thr
>WENV183740143
PJUF01000471
144934
Betaproteobacteria
TTG
Gln
>WENV183741197
PJUF01054533
6969
Betaproteobacteria
GCT
Ser
>WENV183741191
PJUF01053178
109389
Betaproteobacteria
TAG
Leu
>WENV183740990
PJUF01024782
95723
Betaproteobacteria
CAG
Leu
>WENV183741226
PJUF01060611
95723
Betaproteobacteria
CAG
Leu
>WENV183741088
PJUF01039113
254339
Betaproteobacteria
GTG
His
>WENV183741211
PJUF01057821
105933
Betaproteobacteria
GAG
Leu
>WENV183740615
PJUF01004516
95620
Betaproteobacteria
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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