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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029865
FTJL01010138
31263
Betaproteobacteria
CGA
Ser
>WENV180029731
FTJL01002358
178122
Betaproteobacteria
TGG
Pro
>WENV180029704
FTJL01001150
480930
Betaproteobacteria
CCC
Gly
>WENV180029672
FTJL01000098
330401
Betaproteobacteria
GCC
Gly
>WENV180029952
FTJL01032874
330401
Betaproteobacteria
GCC
Gly
>WENV180030242
FTJL01430964
330401
Betaproteobacteria
GCC
Gly
>WENV180029732
FTJL01002358
208821
Betaproteobacteria
TCT
Arg
>WENV180029906
FTJL01017636
20369
Betaproteobacteria
GGA
Ser
>WENV180029872
FTJL01011061
283003
Betaproteobacteria
CCG
Arg
>WENV180030159
FTJL01237371
282862
Betaproteobacteria
TGC
Ala
>WENV180029942
FTJL01029164
73416
Betaproteobacteria
TAG
Leu
>WENV180029675
FTJL01000201
284770
Betaproteobacteria
CTT
Lys
>WENV180029950
FTJL01031001
400162
Betaproteobacteria
GGT
Thr
>WENV180029691
FTJL01000643
210127
Betaproteobacteria
ACG
Arg
>WENV180029765
FTJL01004185
210127
Betaproteobacteria
ACG
Arg
>WENV180029927
FTJL01022999
210127
Betaproteobacteria
ACG
Arg
>WENV180029681
FTJL01000393
118123
Betaproteobacteria
CAG
Leu
>WENV180030100
FTJL01157499
20385
Betaproteobacteria
GGA
Ser
>WENV180030030
FTJL01075355
73839
Betaproteobacteria
CAA
Leu
>WENV180030158
FTJL01237371
176778
Betaproteobacteria
GAT
Ile
>WENV180029896
FTJL01015597
20518
Betaproteobacteria
GGA
Ser
>WENV180029870
FTJL01010855
200194
Betaproteobacteria
TTG
Gln
>WENV180029745
FTJL01003090
5761
Betaproteobacteria
GCT
Ser
>WENV180030198
FTJL01323409
282823
Betaproteobacteria
CGT
Thr
>WENV180029871
FTJL01010916
480929
Betaproteobacteria
GCA
Cys
>WENV180029787
FTJL01005067
178499
Betaproteobacteria
TTG
Gln
>WENV180029998
FTJL01054593
29631
Betaproteobacteria
CGA
Ser
>WENV180029666
FTJL01000021
399347
Betaproteobacteria
CAC
Val
>WENV180029703
FTJL01001078
5917
Betaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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