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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170656612
JTFO01027951
176172
Gammaproteobacteria
>WENV170656805
JTFO01046115
176172
Gammaproteobacteria
>WENV170656628
JTFO01029256
4067
Gammaproteobacteria
>WENV170657317
JTFO01123230
487002
Gammaproteobacteria
GCA
Cys
>WENV170657201
JTFO01100664
280852
Gammaproteobacteria
GTG
His
>WENV170656324
JTFO01010066
280808
Gammaproteobacteria
>WENV170656325
JTFO01010067
280808
Gammaproteobacteria
>WENV170656326
JTFO01010067
280808
Gammaproteobacteria
>WENV170656327
JTFO01010067
280808
Gammaproteobacteria
>WENV170656299
JTFO01009015
117811
Gammaproteobacteria
TAG
Leu
>WENV170656147
JTFO01000972
289747
Gammaproteobacteria
GTG
His
>WENV170657502
JTFO01171080
73828
Gammaproteobacteria
CAG
Leu
>WENV170656464
JTFO01017802
176173
Gammaproteobacteria
>WENV170657198
JTFO01100592
56897
Gammaproteobacteria
TGA
Ser
>WENV170657079
JTFO01080562
317362
Gammaproteobacteria
GGC
Ala
>WENV170656276
JTFO01008238
178544
Gammaproteobacteria
CAT
Met
>WENV170657050
JTFO01072475
218635
Gammaproteobacteria
GAC
Val
>WENV170656296
JTFO01009015
412257
Gammaproteobacteria
TTG
Gln
>WENV170656300
JTFO01009015
412257
Gammaproteobacteria
TTG
Gln
>WENV170656302
JTFO01009015
412257
Gammaproteobacteria
TTG
Gln
>WENV170656731
JTFO01038656
412257
Gammaproteobacteria
TTG
Gln
>WENV170656734
JTFO01038656
412257
Gammaproteobacteria
TTG
Gln
>WENV170657439
JTFO01152648
412257
Gammaproteobacteria
TTG
Gln
>WENV170656598
JTFO01026887
176614
Gammaproteobacteria
GAC
Val
>WENV170656923
JTFO01061516
285363
Gammaproteobacteria
TGT
Thr
>WENV170656120
JTFO01000378
481036
Gammaproteobacteria
GCA
Cys
>WENV170657375
JTFO01137503
176520
Gammaproteobacteria
CAT
Met
>WENV170657360
JTFO01135257
183736
Gammaproteobacteria
TCT
Arg
>WENV170657323
JTFO01124952
73551
Gammaproteobacteria
TAA
Leu
>WENV170656806
JTFO01046115
9399
Gammaproteobacteria
GCT
Ser
>WENV170656218
JTFO01004979
283282
Gammaproteobacteria
TTT
Lys
>WENV170656219
JTFO01004979
283282
Gammaproteobacteria
TTT
Lys
>WENV170656988
JTFO01066650
283282
Gammaproteobacteria
TTT
Lys
>WENV170656989
JTFO01066650
283282
Gammaproteobacteria
TTT
Lys
>WENV170656999
JTFO01067169
281282
Gammaproteobacteria
TTC
Glu
>WENV170657245
JTFO01110143
219509
Gammaproteobacteria
GAT
Ile
>WENV170656398
JTFO01012563
329164
Gammaproteobacteria
TTT
Lys
>WENV170656978
JTFO01065816
329164
Gammaproteobacteria
TTT
Lys
>WENV170656119
JTFO01000378
451238
Gammaproteobacteria
GCC
Gly
>WENV170656826
JTFO01047865
176663
Gammaproteobacteria
GGG
Pro
>WENV170656277
JTFO01008238
118219
Gammaproteobacteria
TAG
Leu
>WENV170656613
JTFO01027951
176214
Gammaproteobacteria
ACG
Arg
>WENV170656807
JTFO01046115
176214
Gammaproteobacteria
ACG
Arg
>WENV170656160
JTFO01001950
56104
Gammaproteobacteria
GGA
Ser
>WENV170657426
JTFO01148661
118262
Gammaproteobacteria
CAA
Leu
>WENV170656298
JTFO01009015
117812
Gammaproteobacteria
TAG
Leu
>WENV170656146
JTFO01000972
178547
Gammaproteobacteria
TCT
Arg
>WENV170656121
JTFO01000378
92638
Gammaproteobacteria
TAA
Leu
>WENV170656122
JTFO01000426
179595
Gammaproteobacteria
GAC
Val
>WENV170656928
JTFO01062378
282947
Gammaproteobacteria
GTT
Asn
>WENV170656579
JTFO01026296
242656
Gammaproteobacteria
GAC
Val
>WENV170656580
JTFO01026296
242656
Gammaproteobacteria
GAC
Val
>WENV170656581
JTFO01026296
242656
Gammaproteobacteria
GAC
Val
>WENV170656303
JTFO01009254
280807
Gammaproteobacteria
CAT
Met
>WENV170656427
JTFO01015333
117821
Gammaproteobacteria
GTA
Tyr
>WENV170657199
JTFO01100592
281352
Gammaproteobacteria
TGT
Thr
>WENV170657363
JTFO01136084
335783
Gammaproteobacteria
GTT
Asn
>WENV170657362
JTFO01136084
335783
Gammaproteobacteria
GTT
Asn
>WENV170657348
JTFO01131352
335783
Gammaproteobacteria
GTT
Asn
>WENV170657347
JTFO01131352
335783
Gammaproteobacteria
GTT
Asn
>WENV170657274
JTFO01115740
335783
Gammaproteobacteria
GTT
Asn
>WENV170657273
JTFO01115740
335783
Gammaproteobacteria
GTT
Asn
>WENV170657267
JTFO01114504
335783
Gammaproteobacteria
GTT
Asn
>WENV170657266
JTFO01114504
335783
Gammaproteobacteria
GTT
Asn
>WENV170657007
JTFO01069215
335783
Gammaproteobacteria
GTT
Asn
>WENV170656864
JTFO01052990
335783
Gammaproteobacteria
GTT
Asn
>WENV170656559
JTFO01025007
335783
Gammaproteobacteria
GTT
Asn
>WENV170657411
JTFO01143814
335783
Gammaproteobacteria
GTT
Asn
>WENV170657412
JTFO01143814
335783
Gammaproteobacteria
GTT
Asn
>WENV170656796
JTFO01044601
176664
Gammaproteobacteria
CCT
Arg
>WENV170657526
JTFO01179465
334421
Gammaproteobacteria
TGT
Thr
>WENV170657514
JTFO01175916
334421
Gammaproteobacteria
TGT
Thr
>WENV170657292
JTFO01119480
334421
Gammaproteobacteria
TGT
Thr
>WENV170656969
JTFO01065247
346373
Gammaproteobacteria
GAA
Phe
>WENV170656332
JTFO01010255
178549
Gammaproteobacteria
GTT
Asn
>WENV170656333
JTFO01010255
178549
Gammaproteobacteria
GTT
Asn
>WENV170656950
JTFO01063998
178549
Gammaproteobacteria
GTT
Asn
>WENV170656465
JTFO01017852
400180
Gammaproteobacteria
CCT
Arg
>WENV170656775
JTFO01042645
209813
Gammaproteobacteria
GAT
Ile
>WENV170657328
JTFO01126797
209813
Gammaproteobacteria
GAT
Ile
>WENV170657340
JTFO01129300
209813
Gammaproteobacteria
GAT
Ile
>WENV170656151
JTFO01001174
195535
Gammaproteobacteria
TCT
Arg
>WENV170657235
JTFO01107194
179582
Gammaproteobacteria
TCT
Arg
>WENV170656647
JTFO01029850
20231
Gammaproteobacteria
TGA
Ser
>WENV170656761
JTFO01041429
20231
Gammaproteobacteria
TGA
Ser
>WENV170656690
JTFO01033797
140787
Gammaproteobacteria
GAG
Leu
>WENV170656301
JTFO01009015
75013
Gammaproteobacteria
CAG
Leu
>WENV170656691
JTFO01033797
238652
Gammaproteobacteria
CAT
Met
>WENV170656656
JTFO01030720
179186
Gammaproteobacteria
TGG
Pro
>WENV170656699
JTFO01035360
179186
Gammaproteobacteria
TGG
Pro
>WENV170656307
JTFO01009464
421507
Gammaproteobacteria
GGT
Thr
>WENV170657397
JTFO01140437
421507
Gammaproteobacteria
GGT
Thr
>WENV170656306
JTFO01009464
402011
Gammaproteobacteria
TCC
Gly
>WENV170657396
JTFO01140437
402011
Gammaproteobacteria
TCC
Gly
>WENV170656139
JTFO01000843
73059
Gammaproteobacteria
TAA
Leu
>WENV170656836
JTFO01049541
218621
Gammaproteobacteria
TGG
Pro
>WENV170656925
JTFO01062096
218621
Gammaproteobacteria
TGG
Pro
>WENV170657200
JTFO01100664
218621
Gammaproteobacteria
TGG
Pro
>WENV170656633
JTFO01029469
178724
Gammaproteobacteria
CAT
Met
>WENV170657127
JTFO01089069
176478
Gammaproteobacteria
CAT
Met
>WENV170657206
JTFO01102273
175989
Gammaproteobacteria
GGG
Pro
>WENV170656266
JTFO01007442
280809
Gammaproteobacteria
GGT
Thr
>WENV170656562
JTFO01025213
179889
Gammaproteobacteria
CCT
Arg
>WENV170656140
JTFO01000843
480510
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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