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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
136 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170672104
LAZR01000001
177028
Gammaproteobacteria
CAT
Met
>WENV170672112
LAZR01000002
178538
Gammaproteobacteria
GTC
Asp
>WENV170672109
LAZR01000002
183701
Gammaproteobacteria
GAT
Ile
>WENV170672134
LAZR01000005
284693
Gammaproteobacteria
TTC
Glu
>WENV170672135
LAZR01000005
284693
Gammaproteobacteria
TTC
Glu
>WENV170672139
LAZR01000005
56340
Gammaproteobacteria
GGA
Ser
>WENV170672144
LAZR01000006
317782
Gammaproteobacteria
TAC
Val
>WENV170672153
LAZR01000007
318157
Gammaproteobacteria
GTT
Asn
>WENV170672150
LAZR01000007
197233
Gammaproteobacteria
CAT
Met
>WENV170672151
LAZR01000007
178538
Gammaproteobacteria
GTC
Asp
>WENV170672152
LAZR01000007
176868
Gammaproteobacteria
CAT
Met
>WENV170672157
LAZR01000010
299227
Gammaproteobacteria
GTT
Asn
>WENV170672156
LAZR01000010
315775
Gammaproteobacteria
TGT
Thr
>WENV170672165
LAZR01000012
178535
Gammaproteobacteria
CCT
Arg
>WENV170672174
LAZR01000018
73498
Gammaproteobacteria
CAA
Leu
>WENV170672190
LAZR01000024
284126
Gammaproteobacteria
>WENV170672206
LAZR01000031
178777
Gammaproteobacteria
CCG
Arg
>WENV170672208
LAZR01000032
299227
Gammaproteobacteria
GTT
Asn
>WENV170672244
LAZR01000034
481314
Gammaproteobacteria
GCA
Cys
>WENV170672247
LAZR01000035
176259
Gammaproteobacteria
TCT
Arg
>WENV170672255
LAZR01000037
118218
Gammaproteobacteria
TAG
Leu
>WENV170672252
LAZR01000037
178540
Gammaproteobacteria
TGG
Pro
>WENV170672251
LAZR01000037
184457
Gammaproteobacteria
GGG
Pro
>WENV170672305
LAZR01000056
190706
Gammaproteobacteria
ACG
Arg
>WENV170672307
LAZR01000057
481314
Gammaproteobacteria
GCA
Cys
>WENV170672346
LAZR01000070
317782
Gammaproteobacteria
TAC
Val
>WENV170672356
LAZR01000076
73501
Gammaproteobacteria
GAG
Leu
>WENV170672367
LAZR01000081
487002
Gammaproteobacteria
GCA
Cys
>WENV170672370
LAZR01000082
315775
Gammaproteobacteria
TGT
Thr
>WENV170672371
LAZR01000083
74115
Gammaproteobacteria
CAG
Leu
>WENV170672384
LAZR01000096
178539
Gammaproteobacteria
GAC
Val
>WENV170672440
LAZR01000159
197233
Gammaproteobacteria
CAT
Met
>WENV170672453
LAZR01000181
178475
Gammaproteobacteria
GAC
Val
>WENV170672468
LAZR01000207
178538
Gammaproteobacteria
GTC
Asp
>WENV170672469
LAZR01000207
178538
Gammaproteobacteria
GTC
Asp
>WENV170672547
LAZR01000294
282922
Gammaproteobacteria
GAA
Phe
>WENV170672575
LAZR01000360
317792
Gammaproteobacteria
TGC
Ala
>WENV170672589
LAZR01000416
21947
Gammaproteobacteria
TGA
Ser
>WENV170672623
LAZR01000484
8605
Gammaproteobacteria
>WENV170672620
LAZR01000484
21947
Gammaproteobacteria
TGA
Ser
>WENV170672621
LAZR01000484
21947
Gammaproteobacteria
TGA
Ser
>WENV170672622
LAZR01000484
21947
Gammaproteobacteria
TGA
Ser
>WENV170672635
LAZR01000570
283227
Gammaproteobacteria
TAC
Val
>WENV170672636
LAZR01000570
283226
Gammaproteobacteria
TAC
Val
>WENV170672637
LAZR01000570
283226
Gammaproteobacteria
TAC
Val
>WENV170672638
LAZR01000570
283226
Gammaproteobacteria
TAC
Val
>WENV170672651
LAZR01000595
21947
Gammaproteobacteria
TGA
Ser
>WENV170672670
LAZR01000781
284126
Gammaproteobacteria
>WENV170672672
LAZR01000781
284126
Gammaproteobacteria
>WENV170672687
LAZR01000886
178471
Gammaproteobacteria
GTT
Asn
>WENV170672706
LAZR01001022
121740
Gammaproteobacteria
TAG
Leu
>WENV170672708
LAZR01001022
121740
Gammaproteobacteria
TAG
Leu
>WENV170672707
LAZR01001022
411344
Gammaproteobacteria
TTG
Gln
>WENV170672709
LAZR01001022
411344
Gammaproteobacteria
TTG
Gln
>WENV170672747
LAZR01001401
121900
Gammaproteobacteria
GAG
Leu
>WENV170672761
LAZR01001604
302111
Gammaproteobacteria
GTT
Asn
>WENV170672786
LAZR01002049
178473
Gammaproteobacteria
TGG
Pro
>WENV170672788
LAZR01002076
178475
Gammaproteobacteria
GAC
Val
>WENV170672794
LAZR01002198
289386
Gammaproteobacteria
GCC
Gly
>WENV170672797
LAZR01002250
283225
Gammaproteobacteria
TGT
Thr
>WENV170672799
LAZR01002250
283225
Gammaproteobacteria
TGT
Thr
>WENV170672805
LAZR01002321
400372
Gammaproteobacteria
CCT
Arg
>WENV170672818
LAZR01002521
178472
Gammaproteobacteria
CAT
Met
>WENV170672868
LAZR01002814
303413
Gammaproteobacteria
GGT
Thr
>WENV170672938
LAZR01003496
176665
Gammaproteobacteria
CGG
Pro
>WENV170672954
LAZR01003693
287558
Gammaproteobacteria
TTC
Glu
>WENV170672953
LAZR01003693
287558
Gammaproteobacteria
TTC
Glu
>WENV170672950
LAZR01003693
287558
Gammaproteobacteria
TTC
Glu
>WENV170672951
LAZR01003693
287558
Gammaproteobacteria
TTC
Glu
>WENV170672952
LAZR01003693
287558
Gammaproteobacteria
TTC
Glu
>WENV170672976
LAZR01003928
480516
Gammaproteobacteria
GCA
Cys
>WENV170672987
LAZR01004136
180053
Gammaproteobacteria
CAT
Met
>WENV170672989
LAZR01004207
178466
Gammaproteobacteria
CCA
Trp
>WENV170673032
LAZR01004761
73863
Gammaproteobacteria
CAG
Leu
>WENV170673051
LAZR01004983
284115
Gammaproteobacteria
TAC
Val
>WENV170673056
LAZR01005235
400373
Gammaproteobacteria
CCG
Arg
>WENV170673065
LAZR01005407
23169
Gammaproteobacteria
GGA
Ser
>WENV170673072
LAZR01005633
283222
Gammaproteobacteria
GTG
His
>WENV170673073
LAZR01005657
118204
Gammaproteobacteria
CAA
Leu
>WENV170673116
LAZR01006669
315771
Gammaproteobacteria
TTT
Lys
>WENV170673117
LAZR01006669
315771
Gammaproteobacteria
TTT
Lys
>WENV170673118
LAZR01006738
178466
Gammaproteobacteria
CCA
Trp
>WENV170673134
LAZR01007014
176301
Gammaproteobacteria
GAT
Ile
>WENV170673135
LAZR01007014
317792
Gammaproteobacteria
TGC
Ala
>WENV170673180
LAZR01007829
176301
Gammaproteobacteria
GAT
Ile
>WENV170673181
LAZR01007829
317792
Gammaproteobacteria
TGC
Ala
>WENV170673198
LAZR01008006
201377
Gammaproteobacteria
TGG
Pro
>WENV170673200
LAZR01008006
281283
Gammaproteobacteria
GTG
His
>WENV170673220
LAZR01008763
73481
Gammaproteobacteria
TAA
Leu
>WENV170673222
LAZR01008763
73481
Gammaproteobacteria
TAA
Leu
>WENV170673219
LAZR01008763
289386
Gammaproteobacteria
GCC
Gly
>WENV170673221
LAZR01008763
289386
Gammaproteobacteria
GCC
Gly
>WENV170673285
LAZR01010303
280812
Gammaproteobacteria
GAA
Phe
>WENV170673312
LAZR01011181
297790
Gammaproteobacteria
TGC
Ala
>WENV170673311
LAZR01011181
176301
Gammaproteobacteria
GAT
Ile
>WENV170673316
LAZR01011241
280876
Gammaproteobacteria
GGT
Thr
>WENV170673324
LAZR01011557
297790
Gammaproteobacteria
TGC
Ala
>WENV170673323
LAZR01011557
176301
Gammaproteobacteria
GAT
Ile
>WENV170673326
LAZR01011606
176301
Gammaproteobacteria
GAT
Ile
>WENV170673327
LAZR01011606
317792
Gammaproteobacteria
TGC
Ala
>WENV170673355
LAZR01011865
178175
Gammaproteobacteria
ACG
Arg
>WENV170673357
LAZR01011923
178175
Gammaproteobacteria
ACG
Arg
>WENV170673403
LAZR01013403
289386
Gammaproteobacteria
GCC
Gly
>WENV170673404
LAZR01013403
289386
Gammaproteobacteria
GCC
Gly
>WENV170673683
LAZR01022913
282893
Gammaproteobacteria
TAC
Val
>WENV170673696
LAZR01023324
297790
Gammaproteobacteria
TGC
Ala
>WENV170673695
LAZR01023324
176301
Gammaproteobacteria
GAT
Ile
>WENV170673719
LAZR01024663
178175
Gammaproteobacteria
ACG
Arg
>WENV170673776
LAZR01028306
281275
Gammaproteobacteria
TGT
Thr
>WENV170673779
LAZR01028306
281276
Gammaproteobacteria
GGT
Thr
>WENV170673778
LAZR01028306
399250
Gammaproteobacteria
TCC
Gly
>WENV170673777
LAZR01028306
140800
Gammaproteobacteria
GTA
Tyr
>WENV170673811
LAZR01029437
178466
Gammaproteobacteria
CCA
Trp
>WENV170673937
LAZR01035969
401830
Gammaproteobacteria
TTG
Gln
>WENV170673959
LAZR01037196
283221
Gammaproteobacteria
GCC
Gly
>WENV170673960
LAZR01037196
481250
Gammaproteobacteria
GCA
Cys
>WENV170674056
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674057
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674058
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674059
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674060
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674061
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674062
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674063
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674064
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674065
LAZR01041509
318157
Gammaproteobacteria
GTT
Asn
>WENV170674092
LAZR01043591
290068
Gammaproteobacteria
TTT
Lys
>WENV170674188
LAZR01049631
74110
Gammaproteobacteria
CAA
Leu
>WENV170674224
LAZR01051831
302240
Gammaproteobacteria
GGC
Ala
>WENV170674370
LAZR01060647
281436
Gammaproteobacteria
TGC
Ala
>WENV170674369
LAZR01060647
176794
Gammaproteobacteria
GAT
Ile
>WENV170674418
LAZR01063625
315771
Gammaproteobacteria
TTT
Lys
>WENV170674451
LAZR01066548
8635
Gammaproteobacteria
GCT
Ser
>WENV170674479
LAZR01069325
178467
Gammaproteobacteria
GGG
Pro
>WENV170674499
LAZR01070322
179149
Gammaproteobacteria
ACG
Arg
>WENV170674498
LAZR01070322
8605
Gammaproteobacteria
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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