This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170728345
LULE01022240
178510
Alphaproteobacteria
ACG
Arg
>WENV170727308
LULE01000001
296698
Alphaproteobacteria
CGC
Ala
>WENV170728333
LULE01020872
446430
Alphaproteobacteria
CAC
Val
>WENV170727351
LULE01000003
179639
Alphaproteobacteria
ACG
Arg
>WENV170727388
LULE01000016
481048
Alphaproteobacteria
GCA
Cys
>WENV170727342
LULE01000002
143406
Alphaproteobacteria
TAG
Leu
>WENV170728133
LULE01010044
424450
Alphaproteobacteria
GGT
Thr
>WENV170727345
LULE01000002
176146
Alphaproteobacteria
CAT
Met
>WENV170727318
LULE01000001
193463
Alphaproteobacteria
CCT
Arg
>WENV170728307
LULE01018738
140963
Alphaproteobacteria
>WENV170727363
LULE01000004
20437
Alphaproteobacteria
GGA
Ser
>WENV170727311
LULE01000001
201940
Alphaproteobacteria
CAT
Met
>WENV170727341
LULE01000002
184691
Alphaproteobacteria
GTG
His
>WENV170727374
LULE01000007
481802
Alphaproteobacteria
TCC
Gly
>WENV170727352
LULE01000003
401037
Alphaproteobacteria
TTG
Gln
>WENV170727394
LULE01000022
481073
Alphaproteobacteria
CTG
Gln
>WENV170728055
LULE01007652
481268
Alphaproteobacteria
TCC
Gly
>WENV170727940
LULE01004865
236192
Alphaproteobacteria
GTG
His
>WENV170728238
LULE01014552
400516
Alphaproteobacteria
TTG
Gln
>WENV170727370
LULE01000006
399480
Alphaproteobacteria
GAA
Phe
>WENV170727355
LULE01000003
487436
Alphaproteobacteria
TCC
Gly
>WENV170727353
LULE01000003
400384
Alphaproteobacteria
TTC
Glu
>WENV170727372
LULE01000006
78115
Alphaproteobacteria
GAG
Leu
>WENV170727315
LULE01000001
282977
Alphaproteobacteria
CAT
Met
>WENV170727334
LULE01000002
439135
Alphaproteobacteria
CAC
Val
>WENV170727701
LULE01001370
431636
Alphaproteobacteria
CTC
Glu
>WENV170728300
LULE01018265
178815
Alphaproteobacteria
GGG
Pro
>WENV170727386
LULE01000012
427571
Alphaproteobacteria
GCC
Gly
>WENV170728270
LULE01016474
283596
Alphaproteobacteria
TTC
Glu
>WENV170727313
LULE01000001
192131
Alphaproteobacteria
GTC
Asp
>WENV170727403
LULE01000041
481074
Alphaproteobacteria
TCC
Gly
>WENV170728562
LULE01045423
122202
Alphaproteobacteria
GTA
Tyr
>WENV170728011
LULE01006731
435083
Alphaproteobacteria
>WENV170727356
LULE01000003
435083
Alphaproteobacteria
>WENV170728453
LULE01032354
198858
Alphaproteobacteria
CAT
Met
>WENV170727414
LULE01000048
118247
Alphaproteobacteria
CAA
Leu
>WENV170727402
LULE01000040
400419
Alphaproteobacteria
TTG
Gln
>WENV170727567
LULE01000494
29655
Alphaproteobacteria
TGA
Ser
>WENV170727373
LULE01000007
400517
Alphaproteobacteria
GGT
Thr
>WENV170728163
LULE01011365
419842
Alphaproteobacteria
GCC
Gly
>WENV170727379
LULE01000010
282658
Alphaproteobacteria
CGT
Thr
>WENV170728376
LULE01025322
145377
Alphaproteobacteria
>WENV170727850
LULE01003121
234327
Alphaproteobacteria
GAT
Ile
>WENV170727368
LULE01000006
400029
Alphaproteobacteria
GGT
Thr
>WENV170727452
LULE01000103
422170
Alphaproteobacteria
GGT
Thr
>WENV170728407
LULE01028458
400515
Alphaproteobacteria
GAC
Val
>WENV170727346
LULE01000002
398994
Alphaproteobacteria
GTT
Asn
>WENV170727369
LULE01000006
29495
Alphaproteobacteria
GCT
Ser
>WENV170727382
LULE01000012
282981
Alphaproteobacteria
CCA
Trp
>WENV170727460
LULE01000123
353624
Alphaproteobacteria
CCA
Trp
>WENV170727813
LULE01002627
353624
Alphaproteobacteria
CCA
Trp
>WENV170728234
LULE01014349
353624
Alphaproteobacteria
CCA
Trp
>WENV170727396
LULE01000024
480900
Alphaproteobacteria
GCA
Cys
>WENV170727339
LULE01000002
398996
Alphaproteobacteria
GCC
Gly
>WENV170727340
LULE01000002
398996
Alphaproteobacteria
GCC
Gly
>WENV170727332
LULE01000002
29598
Alphaproteobacteria
GGA
Ser
>WENV170727413
LULE01000048
178576
Alphaproteobacteria
ACG
Arg
>WENV170727360
LULE01000004
118150
Alphaproteobacteria
TAG
Leu
>WENV170727404
LULE01000041
118150
Alphaproteobacteria
TAG
Leu
>WENV170727380
LULE01000010
283257
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK