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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552321
OOBJ01002772
309417
Bacillota
GGC
Ala
>WENV183552347
OOBJ01003184
158247
Bacillota
>WENV183552397
OOBJ01004335
144612
Bacillota
TCT
Arg
>WENV183552596
OOBJ01014939
144612
Bacillota
TCT
Arg
>WENV183552820
OOBJ01058598
144612
Bacillota
TCT
Arg
>WENV183551759
OOBJ01000053
246392
Bacillota
GTT
Asn
>WENV183552553
OOBJ01011983
235098
Bacillota
GAC
Val
>WENV183552587
OOBJ01014313
235098
Bacillota
GAC
Val
>WENV183552649
OOBJ01019362
235098
Bacillota
GAC
Val
>WENV183552460
OOBJ01007033
44854
Bacillota
TGA
Ser
>WENV183552585
OOBJ01013890
425593
Bacillota
CCC
Gly
>WENV183551813
OOBJ01000086
37549
Bacillota
TAA
Leu
>WENV183552383
OOBJ01004128
37071
Bacillota
TGA
Ser
>WENV183551776
OOBJ01000056
307003
Bacillota
TGC
Ala
>WENV183552224
OOBJ01001682
59312
Bacillota
CAG
Leu
>WENV183552149
OOBJ01001066
193585
Bacillota
CGG
Pro
>WENV183552478
OOBJ01007634
238910
Bacillota
CTT
Lys
>WENV183552342
OOBJ01003084
243119
Bacillota
CTT
Lys
>WENV183552206
OOBJ01001476
338147
Bacillota
CTC
Glu
>WENV183551966
OOBJ01000314
152047
Bacillota
GGG
Pro
>WENV183552601
OOBJ01015366
155273
Bacillota
CAT
Met
>WENV183552212
OOBJ01001550
16820
Bacillota
GCT
Ser
>WENV183552554
OOBJ01012003
340802
Bacillota
TTG
Gln
>WENV183552845
OOBJ01067907
370458
Bacillota
GCC
Gly
>WENV183551982
OOBJ01000348
152512
Bacillota
CCT
Arg
>WENV183551843
OOBJ01000123
152459
Bacillota
GTC
Asp
>WENV183551809
OOBJ01000086
152459
Bacillota
GTC
Asp
>WENV183552743
OOBJ01030674
341763
Bacillota
CTC
Glu
>WENV183552796
OOBJ01046312
41154
Bacillota
TAA
Leu
>WENV183552070
OOBJ01000649
44859
Bacillota
AAG
Leu
>WENV183552450
OOBJ01006781
11034
Bacillota
GGA
Ser
>WENV183552154
OOBJ01001079
274189
Bacillota
TGT
Thr
>WENV183551746
OOBJ01000048
342736
Bacillota
TTG
Gln
>WENV183552413
OOBJ01004919
235079
Bacillota
GAA
Phe
>WENV183552551
OOBJ01011949
338149
Bacillota
CTC
Glu
>WENV183552577
OOBJ01013167
245298
Bacillota
CGG
Pro
>WENV183552427
OOBJ01005466
245298
Bacillota
CGG
Pro
>WENV183552540
OOBJ01011295
287000
Bacillota
GTT
Asn
>WENV183552135
OOBJ01001006
37551
Bacillota
CGA
Ser
>WENV183552295
OOBJ01002361
413152
Bacillota
TCC
Gly
>WENV183552791
OOBJ01043440
201704
Bacillota
GAT
Ile
>WENV183552576
OOBJ01013167
411547
Bacillota
CTG
Gln
>WENV183552426
OOBJ01005466
411547
Bacillota
CTG
Gln
>WENV183552370
OOBJ01003871
411547
Bacillota
CTG
Gln
>WENV183552300
OOBJ01002415
411547
Bacillota
CTG
Gln
>WENV183552732
OOBJ01029517
147684
Bacillota
ACG
Arg
>WENV183552461
OOBJ01007033
4624
Bacillota
GCT
Ser
>WENV183551816
OOBJ01000095
263765
Bacillota
TAC
Val
>WENV183552408
OOBJ01004752
412387
Bacillota
GCA
Cys
>WENV183551761
OOBJ01000053
248683
Bacillota
TTT
Lys
>WENV183551747
OOBJ01000048
248683
Bacillota
TTT
Lys
>WENV183551617
OOBJ01000007
248683
Bacillota
TTT
Lys
>WENV183552279
OOBJ01002180
243399
Bacillota
CCA
Trp
>WENV183552598
OOBJ01015096
235095
Bacillota
GGT
Thr
>WENV183552241
OOBJ01001862
235095
Bacillota
GGT
Thr
>WENV183551812
OOBJ01000086
419945
Bacillota
GCA
Cys
>WENV183551861
OOBJ01000138
194150
Bacillota
TGG
Pro
>WENV183552476
OOBJ01007611
419639
Bacillota
GCA
Cys
>WENV183552310
OOBJ01002563
411549
Bacillota
TTG
Gln
>WENV183552182
OOBJ01001269
411549
Bacillota
TTG
Gln
>WENV183552291
OOBJ01002284
152045
Bacillota
CAT
Met
>WENV183552538
OOBJ01011198
148188
Bacillota
CCG
Arg
>WENV183551863
OOBJ01000138
152046
Bacillota
TCT
Arg
>WENV183552622
OOBJ01017306
80612
Bacillota
GTA
Tyr
>WENV183552280
OOBJ01002180
152051
Bacillota
ACG
Arg
>WENV183551764
OOBJ01000053
243401
Bacillota
CGT
Thr
>WENV183552492
OOBJ01008011
235124
Bacillota
TGG
Pro
>WENV183552376
OOBJ01003940
235124
Bacillota
TGG
Pro
>WENV183552619
OOBJ01017158
345314
Bacillota
TTG
Gln
>WENV183552284
OOBJ01002216
338129
Bacillota
TGT
Thr
>WENV183552414
OOBJ01004922
144583
Bacillota
ACG
Arg
>WENV183552391
OOBJ01004328
247734
Bacillota
TGC
Ala
>WENV183552635
OOBJ01018114
235171
Bacillota
CCA
Trp
>WENV183552552
OOBJ01011949
144621
Bacillota
GTT
Asn
>WENV183552239
OOBJ01001848
144621
Bacillota
GTT
Asn
>WENV183551774
OOBJ01000056
243098
Bacillota
GGT
Thr
>WENV183552381
OOBJ01004103
58712
Bacillota
CAG
Leu
>WENV183552525
OOBJ01010091
245296
Bacillota
CCC
Gly
>WENV183552438
OOBJ01005943
245296
Bacillota
CCC
Gly
>WENV183552141
OOBJ01001025
344240
Bacillota
GCC
Gly
>WENV183551621
OOBJ01000007
344240
Bacillota
GCC
Gly
>WENV183552290
OOBJ01002284
281472
Bacillota
GGT
Thr
>WENV183552140
OOBJ01001025
196632
Bacillota
GTC
Asp
>WENV183551822
OOBJ01000098
196632
Bacillota
GTC
Asp
>WENV183551939
OOBJ01000284
178024
Bacillota
TCT
Arg
>WENV183552134
OOBJ01001006
343021
Bacillota
CAT
Met
>WENV183552440
OOBJ01006052
144594
Bacillota
CAC
Val
>WENV183552497
OOBJ01008368
95563
Bacillota
GTA
Tyr
>WENV183551811
OOBJ01000086
384950
Bacillota
GCC
Gly
>WENV183551758
OOBJ01000053
384950
Bacillota
GCC
Gly
>WENV183552388
OOBJ01004244
338128
Bacillota
TTC
Glu
>WENV183551823
OOBJ01000098
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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