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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
104 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183566216
OOCA01000201
196621
Bacillota
GTC
Asp
>WENV183566278
OOCA01000405
196621
Bacillota
GTC
Asp
>WENV183566288
OOCA01000428
196621
Bacillota
GTC
Asp
>WENV183566329
OOCA01000624
196621
Bacillota
GTC
Asp
>WENV183566355
OOCA01000770
196621
Bacillota
GTC
Asp
>WENV183566602
OOCA01008360
202812
Bacillota
CAT
Met
>WENV183566154
OOCA01000088
309417
Bacillota
GGC
Ala
>WENV183566162
OOCA01000093
309417
Bacillota
GGC
Ala
>WENV183566272
OOCA01000382
309417
Bacillota
GGC
Ala
>WENV183566125
OOCA01000052
144612
Bacillota
TCT
Arg
>WENV183566190
OOCA01000155
235098
Bacillota
GAC
Val
>WENV183566201
OOCA01000176
235098
Bacillota
GAC
Val
>WENV183566273
OOCA01000389
235098
Bacillota
GAC
Val
>WENV183566350
OOCA01000754
235098
Bacillota
GAC
Val
>WENV183566535
OOCA01003994
23769
Bacillota
TAA
Leu
>WENV183566202
OOCA01000176
44854
Bacillota
TGA
Ser
>WENV183566048
OOCA01000004
44854
Bacillota
TGA
Ser
>WENV183566668
OOCA01019649
20749
Bacillota
GCT
Ser
>WENV183566737
OOCA01037903
235154
Bacillota
GTT
Asn
>WENV183566356
OOCA01000770
304022
Bacillota
GCC
Gly
>WENV183566354
OOCA01000770
304022
Bacillota
GCC
Gly
>WENV183566330
OOCA01000624
304022
Bacillota
GCC
Gly
>WENV183566328
OOCA01000624
304022
Bacillota
GCC
Gly
>WENV183566262
OOCA01000321
304022
Bacillota
GCC
Gly
>WENV183566218
OOCA01000201
304022
Bacillota
GCC
Gly
>WENV183566214
OOCA01000201
304022
Bacillota
GCC
Gly
>WENV183566660
OOCA01019508
246023
Bacillota
TGC
Ala
>WENV183566656
OOCA01019068
338147
Bacillota
CTC
Glu
>WENV183566709
OOCA01031220
235294
Bacillota
TGC
Ala
>WENV183566585
OOCA01006702
340802
Bacillota
TTG
Gln
>WENV183566484
OOCA01002379
341763
Bacillota
CTC
Glu
>WENV183566533
OOCA01003994
144668
Bacillota
GTC
Asp
>WENV183566493
OOCA01002711
429429
Bacillota
CCA
Trp
>WENV183566664
OOCA01019590
379268
Bacillota
TTC
Glu
>WENV183566362
OOCA01000796
11034
Bacillota
GGA
Ser
>WENV183566198
OOCA01000173
11034
Bacillota
GGA
Ser
>WENV183566215
OOCA01000201
235117
Bacillota
TAC
Val
>WENV183566353
OOCA01000770
235079
Bacillota
GAA
Phe
>WENV183566327
OOCA01000624
235079
Bacillota
GAA
Phe
>WENV183566261
OOCA01000321
235079
Bacillota
GAA
Phe
>WENV183566217
OOCA01000201
235079
Bacillota
GAA
Phe
>WENV183566705
OOCA01028417
338149
Bacillota
CTC
Glu
>WENV183566207
OOCA01000190
338149
Bacillota
CTC
Glu
>WENV183566122
OOCA01000052
338149
Bacillota
CTC
Glu
>WENV183566046
OOCA01000004
338149
Bacillota
CTC
Glu
>WENV183566683
OOCA01022813
144766
Bacillota
CAT
Met
>WENV183566431
OOCA01001206
245298
Bacillota
CGG
Pro
>WENV183566136
OOCA01000064
245298
Bacillota
CGG
Pro
>WENV183566219
OOCA01000202
37269
Bacillota
TGA
Ser
>WENV183566559
OOCA01005396
162445
Bacillota
CAT
Met
>WENV183566659
OOCA01019508
201704
Bacillota
GAT
Ile
>WENV183566482
OOCA01002329
152492
Bacillota
GGG
Pro
>WENV183566584
OOCA01006702
144610
Bacillota
GTG
His
>WENV183566430
OOCA01001206
411547
Bacillota
CTG
Gln
>WENV183566181
OOCA01000138
411547
Bacillota
CTG
Gln
>WENV183566135
OOCA01000064
411547
Bacillota
CTG
Gln
>WENV183566043
OOCA01000002
411547
Bacillota
CTG
Gln
>WENV183566466
OOCA01001661
147684
Bacillota
ACG
Arg
>WENV183566049
OOCA01000004
4624
Bacillota
GCT
Ser
>WENV183566203
OOCA01000176
4624
Bacillota
GCT
Ser
>WENV183566661
OOCA01019590
411584
Bacillota
TCC
Gly
>WENV183566279
OOCA01000405
235095
Bacillota
GGT
Thr
>WENV183566277
OOCA01000405
235095
Bacillota
GGT
Thr
>WENV183566290
OOCA01000428
235095
Bacillota
GGT
Thr
>WENV183566289
OOCA01000428
235095
Bacillota
GGT
Thr
>WENV183566379
OOCA01000906
419639
Bacillota
GCA
Cys
>WENV183566667
OOCA01019590
235289
Bacillota
GTT
Asn
>WENV183566326
OOCA01000624
411549
Bacillota
TTG
Gln
>WENV183566134
OOCA01000064
411549
Bacillota
TTG
Gln
>WENV183566337
OOCA01000646
148188
Bacillota
CCG
Arg
>WENV183566358
OOCA01000770
80612
Bacillota
GTA
Tyr
>WENV183566351
OOCA01000755
80612
Bacillota
GTA
Tyr
>WENV183566359
OOCA01000771
235124
Bacillota
TGG
Pro
>WENV183566317
OOCA01000549
235124
Bacillota
TGG
Pro
>WENV183566144
OOCA01000072
338129
Bacillota
TGT
Thr
>WENV183566639
OOCA01015626
144672
Bacillota
TCT
Arg
>WENV183566553
OOCA01005354
247734
Bacillota
TGC
Ala
>WENV183566287
OOCA01000428
235171
Bacillota
CCA
Trp
>WENV183566259
OOCA01000321
144621
Bacillota
GTT
Asn
>WENV183566208
OOCA01000190
144621
Bacillota
GTT
Asn
>WENV183566163
OOCA01000093
144621
Bacillota
GTT
Asn
>WENV183566047
OOCA01000004
144621
Bacillota
GTT
Asn
>WENV183566574
OOCA01006226
277200
Bacillota
GGC
Ala
>WENV183566423
OOCA01001140
243098
Bacillota
GGT
Thr
>WENV183566713
OOCA01032702
58712
Bacillota
CAG
Leu
>WENV183566205
OOCA01000189
58712
Bacillota
CAG
Leu
>WENV183566172
OOCA01000115
58712
Bacillota
CAG
Leu
>WENV183566264
OOCA01000345
245296
Bacillota
CCC
Gly
>WENV183566706
OOCA01028417
272992
Bacillota
CTT
Lys
>WENV183566206
OOCA01000190
272992
Bacillota
CTT
Lys
>WENV183566123
OOCA01000052
272992
Bacillota
CTT
Lys
>WENV183566045
OOCA01000004
272992
Bacillota
CTT
Lys
>WENV183566378
OOCA01000906
344240
Bacillota
GCC
Gly
>WENV183566375
OOCA01000901
344240
Bacillota
GCC
Gly
>WENV183566415
OOCA01001113
196632
Bacillota
GTC
Asp
>WENV183566394
OOCA01000997
196632
Bacillota
GTC
Asp
>WENV183566374
OOCA01000901
196632
Bacillota
GTC
Asp
>WENV183566583
OOCA01006702
157635
Bacillota
TCT
Arg
>WENV183566512
OOCA01003412
144594
Bacillota
CAC
Val
>WENV183566171
OOCA01000115
144594
Bacillota
CAC
Val
>WENV183566373
OOCA01000891
338128
Bacillota
TTC
Glu
>WENV183566224
OOCA01000209
338128
Bacillota
TTC
Glu
>WENV183566395
OOCA01000997
245344
Bacillota
GAA
Phe
>WENV183566377
OOCA01000906
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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