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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
94 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183649651
OQVT01003450
196621
Bacillota
GTC
Asp
>WENV183650675
OQVT01034590
196621
Bacillota
GTC
Asp
>WENV183650682
OQVT01034756
196621
Bacillota
GTC
Asp
>WENV183649463
OQVT01001515
37213
Bacillota
TGA
Ser
>WENV183650884
OQVT01048311
144612
Bacillota
TCT
Arg
>WENV183649411
OQVT01001192
267649
Bacillota
TAC
Val
>WENV183650081
OQVT01010775
235134
Bacillota
GAA
Phe
>WENV183650372
OQVT01019450
267556
Bacillota
TAC
Val
>WENV183650454
OQVT01023069
156189
Bacillota
GAT
Ile
>WENV183650566
OQVT01028202
235098
Bacillota
GAC
Val
>WENV183650162
OQVT01012425
235098
Bacillota
GAC
Val
>WENV183650155
OQVT01012320
338152
Bacillota
TTC
Glu
>WENV183650150
OQVT01012072
44854
Bacillota
TGA
Ser
>WENV183650181
OQVT01012985
148348
Bacillota
GTC
Asp
>WENV183650487
OQVT01024423
238910
Bacillota
CTT
Lys
>WENV183650820
OQVT01043092
235150
Bacillota
TGC
Ala
>WENV183651181
OQVT01088358
235294
Bacillota
TGC
Ala
>WENV183649646
OQVT01003391
340802
Bacillota
TTG
Gln
>WENV183650970
OQVT01056511
144668
Bacillota
GTC
Asp
>WENV183650193
OQVT01013224
429429
Bacillota
CCA
Trp
>WENV183650514
OQVT01025300
44859
Bacillota
AAG
Leu
>WENV183650009
OQVT01008779
11034
Bacillota
GGA
Ser
>WENV183651021
OQVT01064251
247057
Bacillota
TGC
Ala
>WENV183651079
OQVT01069992
338550
Bacillota
>WENV183650185
OQVT01012985
37437
Bacillota
TAA
Leu
>WENV183650782
OQVT01040582
235079
Bacillota
GAA
Phe
>WENV183650016
OQVT01008885
235079
Bacillota
GAA
Phe
>WENV183651100
OQVT01073328
173314
Bacillota
GAT
Ile
>WENV183650254
OQVT01015573
245298
Bacillota
CGG
Pro
>WENV183649527
OQVT01002231
245298
Bacillota
CGG
Pro
>WENV183650230
OQVT01014795
287000
Bacillota
GTT
Asn
>WENV183650229
OQVT01014795
287000
Bacillota
GTT
Asn
>WENV183651113
OQVT01076185
115075
Bacillota
TAG
Leu
>WENV183650182
OQVT01012985
286137
Bacillota
GAA
Phe
>WENV183650189
OQVT01012999
152492
Bacillota
GGG
Pro
>WENV183650107
OQVT01011146
152492
Bacillota
GGG
Pro
>WENV183650749
OQVT01038074
144599
Bacillota
GTC
Asp
>WENV183650618
OQVT01031613
153911
Bacillota
GAT
Ile
>WENV183649868
OQVT01006552
100326
Bacillota
GTA
Tyr
>WENV183649645
OQVT01003391
144610
Bacillota
GTG
His
>WENV183650253
OQVT01015573
411547
Bacillota
CTG
Gln
>WENV183650040
OQVT01009723
411547
Bacillota
CTG
Gln
>WENV183649526
OQVT01002231
411547
Bacillota
CTG
Gln
>WENV183649870
OQVT01006558
147684
Bacillota
ACG
Arg
>WENV183649740
OQVT01004661
147684
Bacillota
ACG
Arg
>WENV183650151
OQVT01012072
4624
Bacillota
GCT
Ser
>WENV183651094
OQVT01072556
412387
Bacillota
GCA
Cys
>WENV183650211
OQVT01014014
412387
Bacillota
GCA
Cys
>WENV183650104
OQVT01011114
248683
Bacillota
TTT
Lys
>WENV183650683
OQVT01034756
235095
Bacillota
GGT
Thr
>WENV183650676
OQVT01034590
235095
Bacillota
GGT
Thr
>WENV183649652
OQVT01003450
235095
Bacillota
GGT
Thr
>WENV183650310
OQVT01017203
344183
Bacillota
CTG
Gln
>WENV183650550
OQVT01027613
241471
Bacillota
TGC
Ala
>WENV183651115
OQVT01076185
150597
Bacillota
TCT
Arg
>WENV183650582
OQVT01029171
419639
Bacillota
GCA
Cys
>WENV183651402
OQVT01149790
411549
Bacillota
TTG
Gln
>WENV183650142
OQVT01011999
245386
Bacillota
CCA
Trp
>WENV183649906
OQVT01006952
154711
Bacillota
TGG
Pro
>WENV183650600
OQVT01030549
148188
Bacillota
CCG
Arg
>WENV183651208
OQVT01095214
368876
Bacillota
GCC
Gly
>WENV183650187
OQVT01012985
84171
Bacillota
GAG
Leu
>WENV183651093
OQVT01072556
235638
Bacillota
GAA
Phe
>WENV183649589
OQVT01002929
235124
Bacillota
TGG
Pro
>WENV183651118
OQVT01076185
237963
Bacillota
TTT
Lys
>WENV183650049
OQVT01009934
338129
Bacillota
TGT
Thr
>WENV183651411
OQVT01151783
144583
Bacillota
ACG
Arg
>WENV183651169
OQVT01085739
347851
Bacillota
TTC
Glu
>WENV183650535
OQVT01026328
347851
Bacillota
TTC
Glu
>WENV183650623
OQVT01031728
236037
Bacillota
GTG
His
>WENV183650010
OQVT01008783
127572
Bacillota
ACG
Arg
>WENV183650674
OQVT01034590
235171
Bacillota
CCA
Trp
>WENV183649451
OQVT01001462
238974
Bacillota
GAA
Phe
>WENV183651314
OQVT01122288
144621
Bacillota
GTT
Asn
>WENV183650077
OQVT01010707
235113
Bacillota
GAA
Phe
>WENV183651297
OQVT01118131
353527
Bacillota
TTC
Glu
>WENV183649681
OQVT01003806
243098
Bacillota
GGT
Thr
>WENV183650428
OQVT01021856
58712
Bacillota
CAG
Leu
>WENV183650974
OQVT01056760
245296
Bacillota
CCC
Gly
>WENV183650443
OQVT01022469
344240
Bacillota
GCC
Gly
>WENV183651186
OQVT01088802
196632
Bacillota
GTC
Asp
>WENV183649862
OQVT01006405
248965
Bacillota
GCC
Gly
>WENV183649522
OQVT01002197
248965
Bacillota
GCC
Gly
>WENV183649644
OQVT01003391
157635
Bacillota
TCT
Arg
>WENV183650622
OQVT01031721
144594
Bacillota
CAC
Val
>WENV183649494
OQVT01001771
272488
Bacillota
GAA
Phe
>WENV183650452
OQVT01023058
114075
Bacillota
TAG
Leu
>WENV183650857
OQVT01046020
238945
Bacillota
GCC
Gly
>WENV183650202
OQVT01013579
238945
Bacillota
GCC
Gly
>WENV183649922
OQVT01007246
238945
Bacillota
GCC
Gly
>WENV183649498
OQVT01001815
238945
Bacillota
GCC
Gly
>WENV183650072
OQVT01010554
338128
Bacillota
TTC
Glu
>WENV183649696
OQVT01004016
338128
Bacillota
TTC
Glu
>WENV183651187
OQVT01088802
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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