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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
116 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183734793
PJUA01000013
480996
Bacteroidota
CCA
Trp
>WENV183734852
PJUA01000054
480996
Bacteroidota
CCA
Trp
>WENV183735317
PJUA01011647
176607
Bacteroidota
CAT
Met
>WENV183735117
PJUA01001100
155775
Bacteroidota
TAC
Val
>WENV183734851
PJUA01000054
405962
Bacteroidota
GGT
Thr
>WENV183734988
PJUA01000344
56539
Bacteroidota
TGA
Ser
>WENV183735030
PJUA01000428
56539
Bacteroidota
TGA
Ser
>WENV183735145
PJUA01001218
56539
Bacteroidota
TGA
Ser
>WENV183735169
PJUA01001713
56539
Bacteroidota
TGA
Ser
>WENV183735205
PJUA01003017
56539
Bacteroidota
TGA
Ser
>WENV183735206
PJUA01003017
56539
Bacteroidota
TGA
Ser
>WENV183735230
PJUA01004546
56539
Bacteroidota
TGA
Ser
>WENV183735308
PJUA01010414
56539
Bacteroidota
TGA
Ser
>WENV183735316
PJUA01011351
56539
Bacteroidota
TGA
Ser
>WENV183734783
PJUA01000011
182483
Bacteroidota
GTG
His
>WENV183734753
PJUA01000003
156756
Bacteroidota
TGG
Pro
>WENV183734785
PJUA01000011
156756
Bacteroidota
TGG
Pro
>WENV183734754
PJUA01000003
157796
Bacteroidota
TAC
Val
>WENV183734806
PJUA01000021
157796
Bacteroidota
TAC
Val
>WENV183734807
PJUA01000021
157796
Bacteroidota
TAC
Val
>WENV183734841
PJUA01000049
179377
Bacteroidota
GTG
His
>WENV183735047
PJUA01000594
179377
Bacteroidota
GTG
His
>WENV183735265
PJUA01006466
179377
Bacteroidota
GTG
His
>WENV183734740
PJUA01000002
175908
Bacteroidota
GTC
Asp
>WENV183734741
PJUA01000002
175908
Bacteroidota
GTC
Asp
>WENV183734771
PJUA01000007
282835
Bacteroidota
TCC
Gly
>WENV183734972
PJUA01000299
191942
Bacteroidota
TCG
Arg
>WENV183734744
PJUA01000002
287318
Bacteroidota
GAA
Phe
>WENV183734804
PJUA01000021
287318
Bacteroidota
GAA
Phe
>WENV183735038
PJUA01000527
179373
Bacteroidota
CAT
Met
>WENV183735039
PJUA01000527
179373
Bacteroidota
CAT
Met
>WENV183735137
PJUA01001192
179373
Bacteroidota
CAT
Met
>WENV183735138
PJUA01001192
179373
Bacteroidota
CAT
Met
>WENV183734755
PJUA01000003
140923
Bacteroidota
GTA
Tyr
>WENV183734834
PJUA01000041
140923
Bacteroidota
GTA
Tyr
>WENV183734850
PJUA01000054
140923
Bacteroidota
GTA
Tyr
>WENV183734784
PJUA01000011
74253
Bacteroidota
GCT
Ser
>WENV183734756
PJUA01000003
177083
Bacteroidota
TGT
Thr
>WENV183734757
PJUA01000003
177083
Bacteroidota
TGT
Thr
>WENV183734849
PJUA01000054
177083
Bacteroidota
TGT
Thr
>WENV183734826
PJUA01000037
58240
Bacteroidota
TGA
Ser
>WENV183735292
PJUA01008604
282908
Bacteroidota
TGT
Thr
>WENV183734748
PJUA01000003
285588
Bacteroidota
TTT
Lys
>WENV183734749
PJUA01000003
285588
Bacteroidota
TTT
Lys
>WENV183734751
PJUA01000003
285588
Bacteroidota
TTT
Lys
>WENV183735115
PJUA01001075
284228
Bacteroidota
CAT
Met
>WENV183735194
PJUA01002338
284228
Bacteroidota
CAT
Met
>WENV183735195
PJUA01002338
284228
Bacteroidota
CAT
Met
>WENV183735306
PJUA01010295
284228
Bacteroidota
CAT
Met
>WENV183735368
PJUA01016880
284228
Bacteroidota
CAT
Met
>WENV183735407
PJUA01025284
284228
Bacteroidota
CAT
Met
>WENV183734835
PJUA01000043
283107
Bacteroidota
GCC
Gly
>WENV183735251
PJUA01005699
281213
Bacteroidota
TGT
Thr
>WENV183734780
PJUA01000010
281213
Bacteroidota
TGT
Thr
>WENV183734781
PJUA01000010
281213
Bacteroidota
TGT
Thr
>WENV183734782
PJUA01000010
281213
Bacteroidota
TGT
Thr
>WENV183735095
PJUA01000893
281213
Bacteroidota
TGT
Thr
>WENV183735234
PJUA01004808
281213
Bacteroidota
TGT
Thr
>WENV183735235
PJUA01004808
281213
Bacteroidota
TGT
Thr
>WENV183734779
PJUA01000010
298201
Bacteroidota
TTT
Lys
>WENV183734965
PJUA01000258
298201
Bacteroidota
TTT
Lys
>WENV183735000
PJUA01000364
298201
Bacteroidota
TTT
Lys
>WENV183735031
PJUA01000452
298201
Bacteroidota
TTT
Lys
>WENV183735122
PJUA01001114
298201
Bacteroidota
TTT
Lys
>WENV183735155
PJUA01001437
298201
Bacteroidota
TTT
Lys
>WENV183735174
PJUA01001845
298201
Bacteroidota
TTT
Lys
>WENV183735384
PJUA01020552
298201
Bacteroidota
TTT
Lys
>WENV183735098
PJUA01000893
403862
Bacteroidota
GGT
Thr
>WENV183734871
PJUA01000071
179380
Bacteroidota
GGG
Pro
>WENV183735102
PJUA01000965
179374
Bacteroidota
TGG
Pro
>WENV183735103
PJUA01000965
179374
Bacteroidota
TGG
Pro
>WENV183735104
PJUA01000965
179374
Bacteroidota
TGG
Pro
>WENV183735128
PJUA01001173
179374
Bacteroidota
TGG
Pro
>WENV183735129
PJUA01001173
179374
Bacteroidota
TGG
Pro
>WENV183735216
PJUA01003791
179374
Bacteroidota
TGG
Pro
>WENV183735217
PJUA01003799
179374
Bacteroidota
TGG
Pro
>WENV183735101
PJUA01000965
480500
Bacteroidota
GCA
Cys
>WENV183735172
PJUA01001785
480500
Bacteroidota
GCA
Cys
>WENV183735190
PJUA01002247
480500
Bacteroidota
GCA
Cys
>WENV183735331
PJUA01012734
480500
Bacteroidota
GCA
Cys
>WENV183734742
PJUA01000002
485115
Bacteroidota
TTG
Gln
>WENV183734743
PJUA01000002
485115
Bacteroidota
TTG
Gln
>WENV183734853
PJUA01000054
281460
Bacteroidota
CAT
Met
>WENV183734907
PJUA01000132
281460
Bacteroidota
CAT
Met
>WENV183734823
PJUA01000034
482086
Bacteroidota
>WENV183735028
PJUA01000411
281210
Bacteroidota
GCC
Gly
>WENV183735067
PJUA01000682
281210
Bacteroidota
GCC
Gly
>WENV183735197
PJUA01002438
281210
Bacteroidota
GCC
Gly
>WENV183735283
PJUA01007457
281210
Bacteroidota
GCC
Gly
>WENV183734796
PJUA01000014
56363
Bacteroidota
TGA
Ser
>WENV183734797
PJUA01000014
56363
Bacteroidota
TGA
Ser
>WENV183735099
PJUA01000893
481263
Bacteroidota
CCA
Trp
>WENV183734794
PJUA01000013
409459
Bacteroidota
TTC
Glu
>WENV183734906
PJUA01000132
409459
Bacteroidota
TTC
Glu
>WENV183734824
PJUA01000034
147838
Bacteroidota
CAA
Leu
>WENV183735048
PJUA01000594
147838
Bacteroidota
CAA
Leu
>WENV183735100
PJUA01000940
147838
Bacteroidota
CAA
Leu
>WENV183735269
PJUA01006572
147838
Bacteroidota
CAA
Leu
>WENV183735328
PJUA01012086
147838
Bacteroidota
CAA
Leu
>WENV183735012
PJUA01000371
56146
Bacteroidota
TAA
Leu
>WENV183735167
PJUA01001608
56146
Bacteroidota
TAA
Leu
>WENV183735196
PJUA01002383
56146
Bacteroidota
TAA
Leu
>WENV183734805
PJUA01000021
46780
Bacteroidota
TAA
Leu
>WENV183734836
PJUA01000043
46780
Bacteroidota
TAA
Leu
>WENV183735116
PJUA01001100
156339
Bacteroidota
TAC
Val
>WENV183735118
PJUA01001100
156339
Bacteroidota
TAC
Val
>WENV183735236
PJUA01004809
156339
Bacteroidota
TAC
Val
>WENV183735027
PJUA01000411
281207
Bacteroidota
GAA
Phe
>WENV183735282
PJUA01007457
281207
Bacteroidota
GAA
Phe
>WENV183734745
PJUA01000002
119078
Bacteroidota
TAG
Leu
>WENV183734859
PJUA01000061
284068
Bacteroidota
TTT
Lys
>WENV183734927
PJUA01000153
284068
Bacteroidota
TTT
Lys
>WENV183734795
PJUA01000013
399343
Bacteroidota
TTC
Glu
>WENV183734752
PJUA01000003
178366
Bacteroidota
CAT
Met
>WENV183734983
PJUA01000321
29853
Bacteroidota
GGA
Ser
>WENV183734786
PJUA01000011
184112
Bacteroidota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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