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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183746792
PPCM01000010
304139
Thermodesulfobacteriota
GGC
Ala
>WENV183746856
PPCM01000024
304140
Thermodesulfobacteriota
CTT
Lys
>WENV183746853
PPCM01000024
413602
Thermodesulfobacteriota
GCA
Cys
>WENV183746872
PPCM01000028
159099
Thermodesulfobacteriota
TTC
Glu
>WENV183746873
PPCM01000028
159099
Thermodesulfobacteriota
TTC
Glu
>WENV183746932
PPCM01000046
304141
Thermodesulfobacteriota
CTC
Glu
>WENV183746961
PPCM01000071
304145
Thermodesulfobacteriota
CAT
Met
>WENV183747066
PPCM01000158
413601
Thermodesulfobacteriota
GAC
Val
>WENV183747083
PPCM01000174
198566
Thermodesulfobacteriota
CGG
Pro
>WENV183747090
PPCM01000187
304139
Thermodesulfobacteriota
GGC
Ala
>WENV183747111
PPCM01000215
122347
Thermodesulfobacteriota
TAG
Leu
>WENV183747129
PPCM01000243
200297
Thermodesulfobacteriota
GGG
Pro
>WENV183747152
PPCM01000304
194100
Thermodesulfobacteriota
CCA
Trp
>WENV183747157
PPCM01000327
77009
Thermodesulfobacteriota
CAG
Leu
>WENV183747193
PPCM01000390
410957
Thermodesulfobacteriota
GAC
Val
>WENV183747212
PPCM01000428
300432
Thermodesulfobacteriota
GTT
Asn
>WENV183747213
PPCM01000428
300432
Thermodesulfobacteriota
GTT
Asn
>WENV183747217
PPCM01000437
77009
Thermodesulfobacteriota
CAG
Leu
>WENV183747224
PPCM01000476
195756
Thermodesulfobacteriota
GTC
Asp
>WENV183747234
PPCM01000500
410957
Thermodesulfobacteriota
GAC
Val
>WENV183747272
PPCM01000637
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183747273
PPCM01000637
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183747325
PPCM01000912
121639
Thermodesulfobacteriota
GTA
Tyr
>WENV183747377
PPCM01001248
194099
Thermodesulfobacteriota
ACG
Arg
>WENV183747378
PPCM01001248
194099
Thermodesulfobacteriota
ACG
Arg
>WENV183747387
PPCM01001481
194107
Thermodesulfobacteriota
CAT
Met
>WENV183747388
PPCM01001481
194107
Thermodesulfobacteriota
CAT
Met
>WENV183747461
PPCM01002578
194107
Thermodesulfobacteriota
CAT
Met
>WENV183747482
PPCM01003087
304139
Thermodesulfobacteriota
GGC
Ala
>WENV183747498
PPCM01003486
413602
Thermodesulfobacteriota
GCA
Cys
>WENV183747509
PPCM01003623
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183747510
PPCM01003623
77857
Thermodesulfobacteriota
GAG
Leu
>WENV183747517
PPCM01003725
194100
Thermodesulfobacteriota
CCA
Trp
>WENV183747519
PPCM01003763
31912
Thermodesulfobacteriota
GGA
Ser
>WENV183747530
PPCM01004105
304141
Thermodesulfobacteriota
CTC
Glu
>WENV183747548
PPCM01004741
194100
Thermodesulfobacteriota
CCA
Trp
>WENV183747554
PPCM01005019
294073
Thermodesulfobacteriota
TGC
Ala
>WENV183747560
PPCM01005216
77009
Thermodesulfobacteriota
CAG
Leu
>WENV183747569
PPCM01005619
432790
Thermodesulfobacteriota
GCA
Cys
>WENV183747579
PPCM01006331
194100
Thermodesulfobacteriota
CCA
Trp
>WENV183747594
PPCM01007132
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183747609
PPCM01008773
121639
Thermodesulfobacteriota
GTA
Tyr
>WENV183747625
PPCM01010241
194099
Thermodesulfobacteriota
ACG
Arg
>WENV183747631
PPCM01010945
333379
Thermodesulfobacteriota
TAC
Val
>WENV183747654
PPCM01013857
300432
Thermodesulfobacteriota
GTT
Asn
>WENV183747662
PPCM01014870
122347
Thermodesulfobacteriota
TAG
Leu
>WENV183747663
PPCM01014887
289834
Thermodesulfobacteriota
GAA
Phe
>WENV183747665
PPCM01015173
158984
Thermodesulfobacteriota
TTC
Glu
>WENV183747704
PPCM01019526
304142
Thermodesulfobacteriota
TGC
Ala
>WENV183747711
PPCM01020378
77006
Thermodesulfobacteriota
GAG
Leu
>WENV183747712
PPCM01020468
300432
Thermodesulfobacteriota
GTT
Asn
>WENV183747713
PPCM01020468
300432
Thermodesulfobacteriota
GTT
Asn
>WENV183747715
PPCM01020767
333379
Thermodesulfobacteriota
TAC
Val
>WENV183747727
PPCM01022568
198566
Thermodesulfobacteriota
CGG
Pro
>WENV183747820
PPCM01043870
158984
Thermodesulfobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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