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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170077856
CDZV01000025
243398
Bacillota
TTC
Glu
>WENV170077882
CDZV01001328
153911
Bacillota
GAT
Ile
>WENV170077900
CDZV01001438
271471
Bacillota
GCC
Gly
>WENV170077915
CDZV01001834
413152
Bacillota
TCC
Gly
>WENV170077933
CDZV01002389
245386
Bacillota
CCA
Trp
>WENV170077937
CDZV01002435
413152
Bacillota
TCC
Gly
>WENV170077940
CDZV01002439
342736
Bacillota
TTG
Gln
>WENV170077944
CDZV01002489
144612
Bacillota
TCT
Arg
>WENV170077948
CDZV01002862
341763
Bacillota
CTC
Glu
>WENV170077968
CDZV01003323
202812
Bacillota
CAT
Met
>WENV170077977
CDZV01003841
156189
Bacillota
GAT
Ile
>WENV170077987
CDZV01004397
238910
Bacillota
CTT
Lys
>WENV170077990
CDZV01004397
245386
Bacillota
CCA
Trp
>WENV170077998
CDZV01005292
173314
Bacillota
GAT
Ile
>WENV170078004
CDZV01005347
243401
Bacillota
CGT
Thr
>WENV170078041
CDZV01007352
298620
Bacillota
CAT
Met
>WENV170078109
CDZV01010191
173314
Bacillota
GAT
Ile
>WENV170078120
CDZV01010644
263765
Bacillota
TAC
Val
>WENV170078122
CDZV01010644
235134
Bacillota
GAA
Phe
>WENV170078123
CDZV01010644
240017
Bacillota
GCC
Gly
>WENV170078135
CDZV01011089
243098
Bacillota
GGT
Thr
>WENV170078165
CDZV01012204
338127
Bacillota
TTG
Gln
>WENV170078211
CDZV01014005
156189
Bacillota
GAT
Ile
>WENV170078222
CDZV01014562
241441
Bacillota
GCC
Gly
>WENV170078265
CDZV01015962
201704
Bacillota
GAT
Ile
>WENV170078299
CDZV01017217
263765
Bacillota
TAC
Val
>WENV170078300
CDZV01017217
240017
Bacillota
GCC
Gly
>WENV170078347
CDZV01020466
202812
Bacillota
CAT
Met
>WENV170078374
CDZV01021916
338128
Bacillota
TTC
Glu
>WENV170078381
CDZV01021993
59312
Bacillota
CAG
Leu
>WENV170078392
CDZV01022862
196632
Bacillota
GTC
Asp
>WENV170078393
CDZV01022862
245344
Bacillota
GAA
Phe
>WENV170078394
CDZV01022862
344240
Bacillota
GCC
Gly
>WENV170078395
CDZV01022862
419639
Bacillota
GCA
Cys
>WENV170078402
CDZV01023291
248965
Bacillota
GCC
Gly
>WENV170078406
CDZV01023656
263765
Bacillota
TAC
Val
>WENV170078408
CDZV01023656
235134
Bacillota
GAA
Phe
>WENV170078441
CDZV01025687
247734
Bacillota
TGC
Ala
>WENV170078447
CDZV01025696
263765
Bacillota
TAC
Val
>WENV170078449
CDZV01025696
271471
Bacillota
GCC
Gly
>WENV170078451
CDZV01025709
248965
Bacillota
GCC
Gly
>WENV170078461
CDZV01026238
274189
Bacillota
TGT
Thr
>WENV170078466
CDZV01026244
345314
Bacillota
TTG
Gln
>WENV170078503
CDZV01028290
152047
Bacillota
GGG
Pro
>WENV170078559
CDZV01030621
152459
Bacillota
GTC
Asp
>WENV170078568
CDZV01031362
344240
Bacillota
GCC
Gly
>WENV170078601
CDZV01031913
196632
Bacillota
GTC
Asp
>WENV170078602
CDZV01031913
344240
Bacillota
GCC
Gly
>WENV170078633
CDZV01032948
152459
Bacillota
GTC
Asp
>WENV170078639
CDZV01033437
241441
Bacillota
GCC
Gly
>WENV170078658
CDZV01033853
245386
Bacillota
CCA
Trp
>WENV170078708
CDZV01035692
152512
Bacillota
CCT
Arg
>WENV170078712
CDZV01035703
202812
Bacillota
CAT
Met
>WENV170078762
CDZV01038270
287000
Bacillota
GTT
Asn
>WENV170078763
CDZV01038270
287000
Bacillota
GTT
Asn
>WENV170078788
CDZV01038970
413152
Bacillota
TCC
Gly
>WENV170078830
CDZV01041217
241441
Bacillota
GCC
Gly
>WENV170078858
CDZV01042438
235078
Bacillota
TAC
Val
>WENV170078860
CDZV01042438
235079
Bacillota
GAA
Phe
>WENV170078891
CDZV01043146
157838
Bacillota
GTC
Asp
>WENV170078925
CDZV01044047
429429
Bacillota
CCA
Trp
>WENV170078935
CDZV01044179
263765
Bacillota
TAC
Val
>WENV170078945
CDZV01044656
193585
Bacillota
CGG
Pro
>WENV170078946
CDZV01044656
10943
Bacillota
GGA
Ser
>WENV170078984
CDZV01045869
243398
Bacillota
TTC
Glu
>WENV170078988
CDZV01045972
271471
Bacillota
GCC
Gly
>WENV170078997
CDZV01046855
384950
Bacillota
GCC
Gly
>WENV170078998
CDZV01046855
419945
Bacillota
GCA
Cys
>WENV170078999
CDZV01046855
37549
Bacillota
TAA
Leu
>WENV170079003
CDZV01047147
193585
Bacillota
CGG
Pro
>WENV170079004
CDZV01047147
10943
Bacillota
GGA
Ser
>WENV170079018
CDZV01047384
338128
Bacillota
TTC
Glu
>WENV170079020
CDZV01047386
277200
Bacillota
GGC
Ala
>WENV170079021
CDZV01047407
274189
Bacillota
TGT
Thr
>WENV170079038
CDZV01047922
147684
Bacillota
ACG
Arg
>WENV170079039
CDZV01048189
201704
Bacillota
GAT
Ile
>WENV170079064
CDZV01049913
148188
Bacillota
CCG
Arg
>WENV170079086
CDZV01051289
202812
Bacillota
CAT
Met
>WENV170079087
CDZV01051289
338128
Bacillota
TTC
Glu
>WENV170079109
CDZV01052239
202812
Bacillota
CAT
Met
>WENV170079191
CDZV01055431
152513
Bacillota
GAC
Val
>WENV170079201
CDZV01056211
292012
Bacillota
TGC
Ala
>WENV170079256
CDZV01058205
338128
Bacillota
TTC
Glu
>WENV170079277
CDZV01059213
263765
Bacillota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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