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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170121397
CENM01000309
64904
Gammaproteobacteria
CAA
Leu
>WENV170121463
CENM01026866
64826
Gammaproteobacteria
TAA
Leu
>WENV170121394
CENM01000162
161430
Gammaproteobacteria
CCG
Arg
>WENV170121543
CENM01039698
161118
Gammaproteobacteria
TCT
Arg
>WENV170121542
CENM01039698
159957
Gammaproteobacteria
TGG
Pro
>WENV170121415
CENM01002858
160668
Gammaproteobacteria
CAT
Met
>WENV170121521
CENM01038812
369295
Gammaproteobacteria
CCT
Arg
>WENV170121471
CENM01029429
369857
Gammaproteobacteria
GGT
Thr
>WENV170121503
CENM01036906
49782
Gammaproteobacteria
TGA
Ser
>WENV170121557
CENM01039795
19344
Gammaproteobacteria
GGA
Ser
>WENV170121459
CENM01026392
125783
Gammaproteobacteria
GTA
Tyr
>WENV170121529
CENM01039326
65256
Gammaproteobacteria
TAA
Leu
>WENV170121501
CENM01036750
260947
Gammaproteobacteria
TTG
Gln
>WENV170121412
CENM01002807
105366
Gammaproteobacteria
GAG
Leu
>WENV170121522
CENM01038844
258827
Gammaproteobacteria
GAA
Phe
>WENV170121494
CENM01035527
325641
Gammaproteobacteria
CCA
Trp
>WENV170121545
CENM01039711
271667
Gammaproteobacteria
TTT
Lys
>WENV170121465
CENM01027416
65089
Gammaproteobacteria
CAA
Leu
>WENV170121430
CENM01012400
158710
Gammaproteobacteria
CCG
Arg
>WENV170121500
CENM01036565
26187
Gammaproteobacteria
GGA
Ser
>WENV170121547
CENM01039720
258832
Gammaproteobacteria
CCA
Trp
>WENV170121546
CENM01039715
169863
Gammaproteobacteria
GGG
Pro
>WENV170121414
CENM01002846
189269
Gammaproteobacteria
CGG
Pro
>WENV170121527
CENM01039247
266752
Gammaproteobacteria
CCT
Arg
>WENV170121530
CENM01039359
26462
Gammaproteobacteria
GGA
Ser
>WENV170121519
CENM01038752
67081
Gammaproteobacteria
CAA
Leu
>WENV170121470
CENM01029429
448489
Gammaproteobacteria
TCC
Gly
>WENV170121544
CENM01039698
314116
Gammaproteobacteria
GTG
His
>WENV170121536
CENM01039557
271668
Gammaproteobacteria
TGT
Thr
>WENV170121511
CENM01038257
479393
Gammaproteobacteria
GCA
Cys
>WENV170121552
CENM01039753
410254
Gammaproteobacteria
TTG
Gln
>WENV170121556
CENM01039793
271669
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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