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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
83 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263678
CERC01065997
158433
Gammaproteobacteria
ACG
Arg
>WENV170263041
CERC01014274
159182
Gammaproteobacteria
GGG
Pro
>WENV170263644
CERC01064393
159182
Gammaproteobacteria
GGG
Pro
>WENV170262928
CERC01005488
325913
Gammaproteobacteria
GCC
Gly
>WENV170262929
CERC01005488
325913
Gammaproteobacteria
GCC
Gly
>WENV170262920
CERC01005039
382398
Gammaproteobacteria
CCG
Arg
>WENV170263014
CERC01012151
188985
Gammaproteobacteria
CAT
Met
>WENV170262892
CERC01003358
18505
Gammaproteobacteria
TGA
Ser
>WENV170263607
CERC01062159
18505
Gammaproteobacteria
TGA
Ser
>WENV170263477
CERC01051920
49679
Gammaproteobacteria
GGA
Ser
>WENV170263210
CERC01026653
307335
Gammaproteobacteria
TGT
Thr
>WENV170263213
CERC01027006
263230
Gammaproteobacteria
TTT
Lys
>WENV170263130
CERC01019694
260014
Gammaproteobacteria
GTG
His
>WENV170262934
CERC01005984
9951
Gammaproteobacteria
GCT
Ser
>WENV170262855
CERC01001328
161515
Gammaproteobacteria
CCG
Arg
>WENV170263144
CERC01020877
161116
Gammaproteobacteria
GAC
Val
>WENV170263665
CERC01065348
370375
Gammaproteobacteria
CCT
Arg
>WENV170263464
CERC01050458
161665
Gammaproteobacteria
CCG
Arg
>WENV170262981
CERC01009150
290898
Gammaproteobacteria
GTG
His
>WENV170263553
CERC01057702
290898
Gammaproteobacteria
GTG
His
>WENV170263653
CERC01064702
319314
Gammaproteobacteria
TGT
Thr
>WENV170263206
CERC01026398
115678
Gammaproteobacteria
GTA
Tyr
>WENV170263221
CERC01027763
26461
Gammaproteobacteria
TGA
Ser
>WENV170263441
CERC01047515
8977
Gammaproteobacteria
GCT
Ser
>WENV170263445
CERC01048554
160859
Gammaproteobacteria
GGG
Pro
>WENV170263996
CERC01132374
158573
Gammaproteobacteria
CAT
Met
>WENV170263417
CERC01045093
221435
Gammaproteobacteria
GGG
Pro
>WENV170263350
CERC01037795
259744
Gammaproteobacteria
TAC
Val
>WENV170262997
CERC01010855
160858
Gammaproteobacteria
CCA
Trp
>WENV170263134
CERC01019947
160858
Gammaproteobacteria
CCA
Trp
>WENV170263161
CERC01022731
160858
Gammaproteobacteria
CCA
Trp
>WENV170263999
CERC01132622
260947
Gammaproteobacteria
TTG
Gln
>WENV170263434
CERC01046965
233491
Gammaproteobacteria
CCG
Arg
>WENV170262975
CERC01008641
159177
Gammaproteobacteria
GAC
Val
>WENV170263057
CERC01015546
65163
Gammaproteobacteria
CAA
Leu
>WENV170263407
CERC01044090
287727
Gammaproteobacteria
TTT
Lys
>WENV170263148
CERC01021210
408608
Gammaproteobacteria
CCG
Arg
>WENV170263007
CERC01011732
107345
Gammaproteobacteria
GAG
Leu
>WENV170263180
CERC01023973
107345
Gammaproteobacteria
GAG
Leu
>WENV170262869
CERC01002102
158349
Gammaproteobacteria
>WENV170263371
CERC01040185
158349
Gammaproteobacteria
>WENV170263209
CERC01026439
285013
Gammaproteobacteria
GGT
Thr
>WENV170262966
CERC01007978
172986
Gammaproteobacteria
CCA
Trp
>WENV170263886
CERC01107781
68919
Gammaproteobacteria
CAG
Leu
>WENV170263129
CERC01019694
212837
Gammaproteobacteria
TCT
Arg
>WENV170263593
CERC01060460
65089
Gammaproteobacteria
CAA
Leu
>WENV170263471
CERC01051443
272540
Gammaproteobacteria
GTT
Asn
>WENV170263035
CERC01013646
126541
Gammaproteobacteria
GTA
Tyr
>WENV170262993
CERC01010244
26464
Gammaproteobacteria
GGA
Ser
>WENV170262880
CERC01002809
178533
Gammaproteobacteria
ACG
Arg
>WENV170262881
CERC01002809
178533
Gammaproteobacteria
ACG
Arg
>WENV170262882
CERC01002809
178533
Gammaproteobacteria
ACG
Arg
>WENV170263207
CERC01026439
124716
Gammaproteobacteria
GTA
Tyr
>WENV170263365
CERC01039958
181298
Gammaproteobacteria
>WENV170263347
CERC01037558
108554
Gammaproteobacteria
GAG
Leu
>WENV170263442
CERC01047904
65254
Gammaproteobacteria
TAA
Leu
>WENV170262945
CERC01006544
106574
Gammaproteobacteria
TAG
Leu
>WENV170263183
CERC01024297
128911
Gammaproteobacteria
GTA
Tyr
>WENV170263465
CERC01050534
262291
Gammaproteobacteria
TTC
Glu
>WENV170263694
CERC01066498
262291
Gammaproteobacteria
TTC
Glu
>WENV170262888
CERC01003035
18837
Gammaproteobacteria
TGA
Ser
>WENV170263303
CERC01033152
189269
Gammaproteobacteria
CGG
Pro
>WENV170263755
CERC01073599
258908
Gammaproteobacteria
CCT
Arg
>WENV170263289
CERC01031620
27578
Gammaproteobacteria
CGA
Ser
>WENV170263240
CERC01029334
214281
Gammaproteobacteria
ACG
Arg
>WENV170263414
CERC01044647
161939
Gammaproteobacteria
GAC
Val
>WENV170263569
CERC01058702
161939
Gammaproteobacteria
GAC
Val
>WENV170262992
CERC01010244
259743
Gammaproteobacteria
TTT
Lys
>WENV170263642
CERC01064008
26462
Gammaproteobacteria
GGA
Ser
>WENV170263738
CERC01068257
50028
Gammaproteobacteria
GGA
Ser
>WENV170263239
CERC01029082
67081
Gammaproteobacteria
CAA
Leu
>WENV170263008
CERC01011844
18730
Gammaproteobacteria
GCT
Ser
>WENV170262896
CERC01003646
26256
Gammaproteobacteria
CGA
Ser
>WENV170263242
CERC01029406
161319
Gammaproteobacteria
>WENV170262976
CERC01008641
159176
Gammaproteobacteria
GAC
Val
>WENV170262891
CERC01003216
106850
Gammaproteobacteria
CAA
Leu
>WENV170262844
CERC01000858
65858
Gammaproteobacteria
CAA
Leu
>WENV170263015
CERC01012151
378157
Gammaproteobacteria
TTG
Gln
>WENV170263070
CERC01016406
259746
Gammaproteobacteria
GTG
His
>WENV170263601
CERC01061357
265381
Gammaproteobacteria
GTT
Asn
>WENV170263672
CERC01065792
370629
Gammaproteobacteria
TTT
Lys
>WENV170263437
CERC01047139
166414
Gammaproteobacteria
>WENV170263683
CERC01066148
90637
Gammaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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