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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170263996
CERC01132374
152317
Gammaproteobacteria
CAT
Met
>WENV170263652
CERC01064683
146662
Gammaproteobacteria
GAC
Val
>WENV170262975
CERC01008641
166654
Gammaproteobacteria
GAC
Val
>WENV170263605
CERC01062027
235837
Gammaproteobacteria
GTT
Asn
>WENV170263501
CERC01053601
147373
Gammaproteobacteria
CAT
Met
>WENV170263206
CERC01026398
95633
Gammaproteobacteria
GTA
Tyr
>WENV170263161
CERC01022731
147048
Gammaproteobacteria
CCA
Trp
>WENV170263134
CERC01019947
147048
Gammaproteobacteria
CCA
Trp
>WENV170262997
CERC01010855
147048
Gammaproteobacteria
CCA
Trp
>WENV170263242
CERC01029406
147779
Gammaproteobacteria
CAT
Met
>WENV170262980
CERC01009146
149035
Gammaproteobacteria
CCG
Arg
>WENV170262988
CERC01009916
268606
Gammaproteobacteria
TGT
Thr
>WENV170263289
CERC01031620
24435
Gammaproteobacteria
CGA
Ser
>WENV170263417
CERC01045093
160030
Gammaproteobacteria
GGG
Pro
>WENV170263444
CERC01048287
269248
Gammaproteobacteria
CCA
Trp
>WENV170263105
CERC01018084
276072
Gammaproteobacteria
>WENV170262990
CERC01010221
163940
Gammaproteobacteria
CCG
Arg
>WENV170263221
CERC01027763
24434
Gammaproteobacteria
TGA
Ser
>WENV170263070
CERC01016406
237709
Gammaproteobacteria
GTG
His
>WENV170262966
CERC01007978
149036
Gammaproteobacteria
CCA
Trp
>WENV170263644
CERC01064393
147778
Gammaproteobacteria
GGG
Pro
>WENV170263041
CERC01014274
147778
Gammaproteobacteria
GGG
Pro
>WENV170263519
CERC01054422
416652
Gammaproteobacteria
TTG
Gln
>WENV170263569
CERC01058702
146791
Gammaproteobacteria
GAC
Val
>WENV170263414
CERC01044647
146791
Gammaproteobacteria
GAC
Val
>WENV170262946
CERC01006663
161409
Gammaproteobacteria
GGG
Pro
>WENV170262992
CERC01010244
238511
Gammaproteobacteria
TTT
Lys
>WENV170263694
CERC01066498
237425
Gammaproteobacteria
TTC
Glu
>WENV170263465
CERC01050534
237425
Gammaproteobacteria
TTC
Glu
>WENV170263283
CERC01030709
174801
Gammaproteobacteria
TGG
Pro
>WENV170263371
CERC01040185
149073
Gammaproteobacteria
CAT
Met
>WENV170263347
CERC01037558
99005
Gammaproteobacteria
GAG
Leu
>WENV170263331
CERC01036150
412799
Gammaproteobacteria
GCA
Cys
>WENV170262841
CERC01000532
412799
Gammaproteobacteria
GCA
Cys
>WENV170262989
CERC01010104
340801
Gammaproteobacteria
CCT
Arg
>WENV170262934
CERC01005984
6976
Gammaproteobacteria
GCT
Ser
>WENV170263230
CERC01028458
241230
Gammaproteobacteria
GAA
Phe
>WENV170262888
CERC01003035
16394
Gammaproteobacteria
TGA
Ser
>WENV170263665
CERC01065348
339596
Gammaproteobacteria
CCT
Arg
>WENV170263210
CERC01026653
239650
Gammaproteobacteria
TGT
Thr
>WENV170263144
CERC01020877
152450
Gammaproteobacteria
GAC
Val
>WENV170262976
CERC01008641
152450
Gammaproteobacteria
GAC
Val
>WENV170263442
CERC01047904
62553
Gammaproteobacteria
TAA
Leu
>WENV170262993
CERC01010244
23644
Gammaproteobacteria
GGA
Ser
>WENV170262929
CERC01005488
237708
Gammaproteobacteria
GCC
Gly
>WENV170262928
CERC01005488
237708
Gammaproteobacteria
GCC
Gly
>WENV170263593
CERC01060460
58815
Gammaproteobacteria
CAA
Leu
>WENV170263208
CERC01026439
412476
Gammaproteobacteria
TCC
Gly
>WENV170263642
CERC01064008
23429
Gammaproteobacteria
GGA
Ser
>WENV170262869
CERC01002102
147051
Gammaproteobacteria
CAT
Met
>WENV170263471
CERC01051443
249882
Gammaproteobacteria
GTT
Asn
>WENV170263999
CERC01132622
241136
Gammaproteobacteria
TTG
Gln
>WENV170263365
CERC01039958
151889
Gammaproteobacteria
CAT
Met
>WENV170263755
CERC01073599
238372
Gammaproteobacteria
CCT
Arg
>WENV170263653
CERC01064702
243485
Gammaproteobacteria
TGT
Thr
>WENV170263248
CERC01029837
45459
Gammaproteobacteria
GGA
Ser
>WENV170263535
CERC01056290
262546
Gammaproteobacteria
TGC
Ala
>WENV170262932
CERC01005773
262546
Gammaproteobacteria
TGC
Ala
>WENV170262874
CERC01002410
262546
Gammaproteobacteria
TGC
Ala
>WENV170262844
CERC01000858
59658
Gammaproteobacteria
CAA
Leu
>WENV170263034
CERC01013646
237421
Gammaproteobacteria
TGT
Thr
>WENV170263350
CERC01037795
237713
Gammaproteobacteria
TAC
Val
>WENV170263130
CERC01019694
237159
Gammaproteobacteria
GTG
His
>WENV170263738
CERC01068257
45411
Gammaproteobacteria
GGA
Ser
>WENV170263477
CERC01051920
45411
Gammaproteobacteria
GGA
Ser
>WENV170263607
CERC01062159
16460
Gammaproteobacteria
TGA
Ser
>WENV170262892
CERC01003358
16460
Gammaproteobacteria
TGA
Ser
>WENV170262891
CERC01003216
96080
Gammaproteobacteria
CAA
Leu
>WENV170262882
CERC01002809
147776
Gammaproteobacteria
ACG
Arg
>WENV170262881
CERC01002809
147776
Gammaproteobacteria
ACG
Arg
>WENV170262880
CERC01002809
147776
Gammaproteobacteria
ACG
Arg
>WENV170263399
CERC01043212
157977
Gammaproteobacteria
TGG
Pro
>WENV170263445
CERC01048554
147049
Gammaproteobacteria
GGG
Pro
>WENV170263662
CERC01065242
173617
Gammaproteobacteria
GTC
Asp
>WENV170263332
CERC01036337
173617
Gammaproteobacteria
GTC
Asp
>WENV170263464
CERC01050458
150183
Gammaproteobacteria
CCG
Arg
>WENV170263209
CERC01026439
239187
Gammaproteobacteria
GGT
Thr
>WENV170263353
CERC01038343
179150
Gammaproteobacteria
CAT
Met
>WENV170263172
CERC01023558
179150
Gammaproteobacteria
CAT
Met
>WENV170262953
CERC01007035
179150
Gammaproteobacteria
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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