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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170538671
CEWR01104773
183605
Gammaproteobacteria
CCG
Arg
>WENV170539405
CEWR01200391
338635
Gammaproteobacteria
GGT
Thr
>WENV170538185
CEWR01059588
238438
Gammaproteobacteria
>WENV170538498
CEWR01086991
238438
Gammaproteobacteria
>WENV170538342
CEWR01071835
281920
Gammaproteobacteria
CCA
Trp
>WENV170539314
CEWR01166090
160030
Gammaproteobacteria
GGG
Pro
>WENV170537585
CEWR01016226
95866
Gammaproteobacteria
GTA
Tyr
>WENV170537778
CEWR01027860
149578
Gammaproteobacteria
ACG
Arg
>WENV170538478
CEWR01085004
148148
Gammaproteobacteria
GAC
Val
>WENV170539527
CEWR01241973
237221
Gammaproteobacteria
GGC
Ala
>WENV170538135
CEWR01056320
411767
Gammaproteobacteria
TCC
Gly
>WENV170539570
CEWR01254897
239650
Gammaproteobacteria
TGT
Thr
>WENV170538584
CEWR01096144
239650
Gammaproteobacteria
TGT
Thr
>WENV170538138
CEWR01056483
146641
Gammaproteobacteria
ACG
Arg
>WENV170538137
CEWR01056483
146641
Gammaproteobacteria
ACG
Arg
>WENV170537872
CEWR01035567
278046
Gammaproteobacteria
TGT
Thr
>WENV170538072
CEWR01051015
152301
Gammaproteobacteria
GAT
Ile
>WENV170537414
CEWR01004580
152301
Gammaproteobacteria
GAT
Ile
>WENV170538606
CEWR01098112
236029
Gammaproteobacteria
TGC
Ala
>WENV170539615
CEWR01269108
236032
Gammaproteobacteria
GAA
Phe
>WENV170539448
CEWR01214133
250885
Gammaproteobacteria
TGC
Ala
>WENV170537888
CEWR01036576
146642
Gammaproteobacteria
CCA
Trp
>WENV170538614
CEWR01098604
186449
Gammaproteobacteria
TGG
Pro
>WENV170537932
CEWR01040232
186449
Gammaproteobacteria
TGG
Pro
>WENV170538133
CEWR01056320
236033
Gammaproteobacteria
TGT
Thr
>WENV170538685
CEWR01106122
149661
Gammaproteobacteria
CAT
Met
>WENV170537812
CEWR01030006
237223
Gammaproteobacteria
TTT
Lys
>WENV170537642
CEWR01019587
237223
Gammaproteobacteria
TTT
Lys
>WENV170537432
CEWR01006552
237421
Gammaproteobacteria
TGT
Thr
>WENV170539220
CEWR01156737
101786
Gammaproteobacteria
GAG
Leu
>WENV170538453
CEWR01081875
240536
Gammaproteobacteria
TTT
Lys
>WENV170539383
CEWR01193352
236034
Gammaproteobacteria
CCT
Arg
>WENV170537777
CEWR01027860
17379
Gammaproteobacteria
GCT
Ser
>WENV170538403
CEWR01077616
113872
Gammaproteobacteria
GTA
Tyr
>WENV170537980
CEWR01042721
17774
Gammaproteobacteria
TGA
Ser
>WENV170537853
CEWR01034366
236031
Gammaproteobacteria
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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