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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170537345
CEWR01000824
376141
Gammaproteobacteria
TTG
Gln
>WENV170537357
CEWR01001180
203391
Gammaproteobacteria
GAT
Ile
>WENV170537358
CEWR01001180
259140
Gammaproteobacteria
TGC
Ala
>WENV170537435
CEWR01006552
257590
Gammaproteobacteria
GGT
Thr
>WENV170537505
CEWR01010642
231877
Gammaproteobacteria
GAT
Ile
>WENV170537586
CEWR01016226
451464
Gammaproteobacteria
TCC
Gly
>WENV170537642
CEWR01019587
305695
Gammaproteobacteria
TTT
Lys
>WENV170537777
CEWR01027860
18437
Gammaproteobacteria
GCT
Ser
>WENV170537812
CEWR01030006
305695
Gammaproteobacteria
TTT
Lys
>WENV170537813
CEWR01030013
178915
Gammaproteobacteria
CGG
Pro
>WENV170537888
CEWR01036576
188464
Gammaproteobacteria
CCA
Trp
>WENV170538062
CEWR01050077
236600
Gammaproteobacteria
GTC
Asp
>WENV170538134
CEWR01056320
127858
Gammaproteobacteria
GTA
Tyr
>WENV170538135
CEWR01056320
448489
Gammaproteobacteria
TCC
Gly
>WENV170538133
CEWR01056320
258828
Gammaproteobacteria
TGT
Thr
>WENV170538137
CEWR01056483
169391
Gammaproteobacteria
ACG
Arg
>WENV170538138
CEWR01056483
169391
Gammaproteobacteria
ACG
Arg
>WENV170538159
CEWR01058069
257590
Gammaproteobacteria
GGT
Thr
>WENV170538185
CEWR01059588
269163
Gammaproteobacteria
TTC
Glu
>WENV170538347
CEWR01072234
257895
Gammaproteobacteria
TTT
Lys
>WENV170538348
CEWR01072234
257895
Gammaproteobacteria
TTT
Lys
>WENV170538403
CEWR01077616
124611
Gammaproteobacteria
GTA
Tyr
>WENV170538449
CEWR01081729
105430
Gammaproteobacteria
GTA
Tyr
>WENV170538453
CEWR01081875
265514
Gammaproteobacteria
TTT
Lys
>WENV170538468
CEWR01083442
212548
Gammaproteobacteria
CCG
Arg
>WENV170538479
CEWR01085110
448974
Gammaproteobacteria
GCA
Cys
>WENV170538585
CEWR01096144
128911
Gammaproteobacteria
GTA
Tyr
>WENV170538918
CEWR01132838
51060
Gammaproteobacteria
GGA
Ser
>WENV170539076
CEWR01147732
291145
Gammaproteobacteria
TTC
Glu
>WENV170539294
CEWR01159447
263086
Gammaproteobacteria
GTT
Asn
>WENV170539313
CEWR01164993
107369
Gammaproteobacteria
CAA
Leu
>WENV170539314
CEWR01166090
221435
Gammaproteobacteria
GGG
Pro
>WENV170539383
CEWR01193352
266752
Gammaproteobacteria
CCT
Arg
>WENV170539405
CEWR01200391
369857
Gammaproteobacteria
GGT
Thr
>WENV170539448
CEWR01214133
261154
Gammaproteobacteria
TGC
Ala
>WENV170539527
CEWR01241973
258493
Gammaproteobacteria
GGC
Ala
>WENV170539615
CEWR01269108
258827
Gammaproteobacteria
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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