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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
93 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180005868
FLRX01014132
412480
Bacteroidota
>WENV180005972
FLRX01069330
412480
Bacteroidota
>WENV180005788
FLRX01000764
148097
Bacteroidota
TGG
Pro
>WENV180005801
FLRX01001170
237796
Bacteroidota
CGT
Thr
>WENV180006184
FLRX01237140
237796
Bacteroidota
CGT
Thr
>WENV180005813
FLRX01001627
97336
Bacteroidota
CAG
Leu
>WENV180005856
FLRX01010838
340120
Bacteroidota
CCT
Arg
>WENV180006201
FLRX01250726
340120
Bacteroidota
CCT
Arg
>WENV180006206
FLRX01255907
340120
Bacteroidota
CCT
Arg
>WENV180005878
FLRX01016456
413663
Bacteroidota
CTG
Gln
>WENV180005988
FLRX01078044
413663
Bacteroidota
CTG
Gln
>WENV180006092
FLRX01149037
413663
Bacteroidota
CTG
Gln
>WENV180005941
FLRX01041029
237797
Bacteroidota
CCA
Trp
>WENV180005792
FLRX01000867
237797
Bacteroidota
CCA
Trp
>WENV180005782
FLRX01000337
237797
Bacteroidota
CCA
Trp
>WENV180006101
FLRX01155418
148096
Bacteroidota
GTG
His
>WENV180005850
FLRX01008836
148096
Bacteroidota
GTG
His
>WENV180005827
FLRX01002774
148096
Bacteroidota
GTG
His
>WENV180005795
FLRX01000952
144695
Bacteroidota
CAT
Met
>WENV180006023
FLRX01093903
238811
Bacteroidota
CAT
Met
>WENV180005857
FLRX01011097
238811
Bacteroidota
CAT
Met
>WENV180006120
FLRX01177363
238811
Bacteroidota
CAT
Met
>WENV180005876
FLRX01015452
412479
Bacteroidota
TTG
Gln
>WENV180005800
FLRX01001161
412479
Bacteroidota
TTG
Gln
>WENV180005904
FLRX01027253
147147
Bacteroidota
GTG
His
>WENV180005889
FLRX01021294
147147
Bacteroidota
GTG
His
>WENV180005976
FLRX01070669
155123
Bacteroidota
GTT
Asn
>WENV180005863
FLRX01013432
155123
Bacteroidota
GTT
Asn
>WENV180005843
FLRX01007746
155123
Bacteroidota
GTT
Asn
>WENV180005829
FLRX01003735
155123
Bacteroidota
GTT
Asn
>WENV180005820
FLRX01001970
155123
Bacteroidota
GTT
Asn
>WENV180006106
FLRX01161694
353373
Bacteroidota
>WENV180006122
FLRX01179849
238810
Bacteroidota
CGG
Pro
>WENV180005869
FLRX01014346
238810
Bacteroidota
CGG
Pro
>WENV180006155
FLRX01215659
127253
Bacteroidota
GGG
Pro
>WENV180006204
FLRX01255839
37076
Bacteroidota
TAA
Leu
>WENV180005913
FLRX01029448
37076
Bacteroidota
TAA
Leu
>WENV180005907
FLRX01028397
37076
Bacteroidota
TAA
Leu
>WENV180005826
FLRX01002670
37076
Bacteroidota
TAA
Leu
>WENV180005787
FLRX01000744
37076
Bacteroidota
TAA
Leu
>WENV180005846
FLRX01008093
343565
Bacteroidota
GTG
His
>WENV180006100
FLRX01154278
251266
Bacteroidota
CTT
Lys
>WENV180006099
FLRX01154278
251266
Bacteroidota
CTT
Lys
>WENV180006176
FLRX01230930
244295
Bacteroidota
CCA
Trp
>WENV180005918
FLRX01030563
339634
Bacteroidota
CCT
Arg
>WENV180005887
FLRX01020275
339634
Bacteroidota
CCT
Arg
>WENV180005799
FLRX01001112
339634
Bacteroidota
CCT
Arg
>WENV180005848
FLRX01008614
96109
Bacteroidota
TAG
Leu
>WENV180005786
FLRX01000655
96109
Bacteroidota
TAG
Leu
>WENV180005928
FLRX01034724
96109
Bacteroidota
TAG
Leu
>WENV180006160
FLRX01219109
96147
Bacteroidota
TAG
Leu
>WENV180006091
FLRX01148186
96147
Bacteroidota
TAG
Leu
>WENV180005886
FLRX01019659
16898
Bacteroidota
GGA
Ser
>WENV180006017
FLRX01091873
412235
Bacteroidota
>WENV180005864
FLRX01013594
412235
Bacteroidota
>WENV180005888
FLRX01021171
339996
Bacteroidota
TTC
Glu
>WENV180006080
FLRX01136076
147148
Bacteroidota
CAT
Met
>WENV180005954
FLRX01055499
147148
Bacteroidota
CAT
Met
>WENV180005903
FLRX01027107
147148
Bacteroidota
CAT
Met
>WENV180005851
FLRX01009006
147148
Bacteroidota
CAT
Met
>WENV180005780
FLRX01000125
147148
Bacteroidota
CAT
Met
>WENV180006047
FLRX01110044
415558
Bacteroidota
TTG
Gln
>WENV180006111
FLRX01164894
175704
Bacteroidota
TGC
Ala
>WENV180005778
FLRX01000036
419272
Bacteroidota
CTG
Gln
>WENV180005832
FLRX01005177
151121
Bacteroidota
CAT
Met
>WENV180005853
FLRX01010094
280469
Bacteroidota
CGT
Thr
>WENV180006159
FLRX01219054
354570
Bacteroidota
TTC
Glu
>WENV180005993
FLRX01080667
244299
Bacteroidota
CGG
Pro
>WENV180005898
FLRX01025272
60485
Bacteroidota
GAG
Leu
>WENV180006194
FLRX01244948
127951
Bacteroidota
TAC
Val
>WENV180005923
FLRX01033304
127951
Bacteroidota
TAC
Val
>WENV180005953
FLRX01055063
238606
Bacteroidota
CGG
Pro
>WENV180006104
FLRX01156526
95986
Bacteroidota
GTA
Tyr
>WENV180005896
FLRX01023624
95986
Bacteroidota
GTA
Tyr
>WENV180005838
FLRX01006169
95986
Bacteroidota
GTA
Tyr
>WENV180005834
FLRX01005423
95986
Bacteroidota
GTA
Tyr
>WENV180005938
FLRX01040044
16494
Bacteroidota
GGA
Ser
>WENV180005781
FLRX01000307
16494
Bacteroidota
GGA
Ser
>WENV180006083
FLRX01140203
153084
Bacteroidota
GTT
Asn
>WENV180005819
FLRX01001691
238607
Bacteroidota
TTT
Lys
>WENV180005950
FLRX01052407
132360
Bacteroidota
GGG
Pro
>WENV180006207
FLRX01255912
146762
Bacteroidota
TGG
Pro
>WENV180006116
FLRX01173392
412236
Bacteroidota
CCC
Gly
>WENV180005929
FLRX01034930
412236
Bacteroidota
CCC
Gly
>WENV180005816
FLRX01001666
412236
Bacteroidota
CCC
Gly
>WENV180005845
FLRX01007819
412423
Bacteroidota
CTG
Gln
>WENV180005901
FLRX01026713
146764
Bacteroidota
GTC
Asp
>WENV180006022
FLRX01093603
60484
Bacteroidota
CAA
Leu
>WENV180005814
FLRX01001627
59498
Bacteroidota
GAG
Leu
>WENV180006004
FLRX01083946
413953
Bacteroidota
GCA
Cys
>WENV180006012
FLRX01090575
127023
Bacteroidota
GGG
Pro
>WENV180005855
FLRX01010230
153083
Bacteroidota
TCT
Arg
>WENV180005927
FLRX01034593
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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