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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170785040
MDSP01000001
148446
Bacillota
TCT
Arg
>WENV170785044
MDSP01000001
118788
Bacillota
TAG
Leu
>WENV170785046
MDSP01000001
148446
Bacillota
TCT
Arg
>WENV170785050
MDSP01000001
148449
Bacillota
GTC
Asp
>WENV170785051
MDSP01000001
238853
Bacillota
TAC
Val
>WENV170785054
MDSP01000025
148449
Bacillota
GTC
Asp
>WENV170785055
MDSP01000025
238853
Bacillota
TAC
Val
>WENV170785056
MDSP01000025
277230
Bacillota
TGT
Thr
>WENV170785063
MDSP01000029
277230
Bacillota
TGT
Thr
>WENV170785065
MDSP01000029
148449
Bacillota
GTC
Asp
>WENV170785066
MDSP01000029
238853
Bacillota
TAC
Val
>WENV170785067
MDSP01000029
277230
Bacillota
TGT
Thr
>WENV170785071
MDSP01000032
148449
Bacillota
GTC
Asp
>WENV170785072
MDSP01000032
238853
Bacillota
TAC
Val
>WENV170785083
MDSP01000082
379268
Bacillota
TTC
Glu
>WENV170785084
MDSP01000082
277230
Bacillota
TGT
Thr
>WENV170785086
MDSP01000082
148449
Bacillota
GTC
Asp
>WENV170785092
MDSP01000121
148449
Bacillota
GTC
Asp
>WENV170785093
MDSP01000121
238853
Bacillota
TAC
Val
>WENV170785094
MDSP01000121
277230
Bacillota
TGT
Thr
>WENV170785111
MDSP01000164
379268
Bacillota
TTC
Glu
>WENV170785112
MDSP01000164
411585
Bacillota
GCA
Cys
>WENV170785113
MDSP01000166
148449
Bacillota
GTC
Asp
>WENV170785146
MDSP01000554
118788
Bacillota
TAG
Leu
>WENV170785161
MDSP01000741
283811
Bacillota
TGC
Ala
>WENV170785166
MDSP01000826
173811
Bacillota
GTC
Asp
>WENV170785180
MDSP01001145
173811
Bacillota
GTC
Asp
>WENV170785182
MDSP01001145
277230
Bacillota
TGT
Thr
>WENV170785192
MDSP01001382
114359
Bacillota
TAG
Leu
>WENV170785205
MDSP01001966
235294
Bacillota
TGC
Ala
>WENV170785209
MDSP01002154
379268
Bacillota
TTC
Glu
>WENV170785213
MDSP01002154
114359
Bacillota
TAG
Leu
>WENV170785224
MDSP01002776
173811
Bacillota
GTC
Asp
>WENV170785225
MDSP01002776
65679
Bacillota
TAA
Leu
>WENV170785283
MDSP01007371
283811
Bacillota
TGC
Ala
>WENV170785295
MDSP01011908
379268
Bacillota
TTC
Glu
>WENV170785296
MDSP01011908
411585
Bacillota
GCA
Cys
>WENV170785321
MDSP01016322
235294
Bacillota
TGC
Ala
>WENV170785323
MDSP01016942
283811
Bacillota
TGC
Ala
>WENV170785328
MDSP01020332
379268
Bacillota
TTC
Glu
>WENV170785329
MDSP01020332
277230
Bacillota
TGT
Thr
>WENV170785331
MDSP01020332
173811
Bacillota
GTC
Asp
>WENV170785342
MDSP01023429
379268
Bacillota
TTC
Glu
>WENV170785343
MDSP01023429
411585
Bacillota
GCA
Cys
>WENV170785352
MDSP01025988
379268
Bacillota
TTC
Glu
>WENV170785358
MDSP01027043
313104
Bacillota
TAC
Val
>WENV170785359
MDSP01027043
163943
Bacillota
GTC
Asp
>WENV170785361
MDSP01027043
338544
Bacillota
TGT
Thr
>WENV170785363
MDSP01027043
411584
Bacillota
TCC
Gly
>WENV170785366
MDSP01027043
163753
Bacillota
TGG
Pro
>WENV170785370
MDSP01027496
283807
Bacillota
TAC
Val
>WENV170785371
MDSP01027496
24650
Bacillota
TAA
Leu
>WENV170785375
MDSP01028229
274189
Bacillota
TGT
Thr
>WENV170785382
MDSP01030085
173811
Bacillota
GTC
Asp
>WENV170785385
MDSP01031379
283811
Bacillota
TGC
Ala
>WENV170785399
MDSP01034501
379268
Bacillota
TTC
Glu
>WENV170785400
MDSP01034501
277230
Bacillota
TGT
Thr
>WENV170785413
MDSP01040668
175676
Bacillota
GAT
Ile
>WENV170785414
MDSP01040668
283811
Bacillota
TGC
Ala
>WENV170785467
MDSP01072664
379268
Bacillota
TTC
Glu
>WENV170785468
MDSP01072664
436750
Bacillota
TCC
Gly
>WENV170785469
MDSP01072664
313104
Bacillota
TAC
Val
>WENV170785470
MDSP01072664
163943
Bacillota
GTC
Asp
>WENV170785472
MDSP01072664
338206
Bacillota
TGT
Thr
>WENV170785474
MDSP01072664
116350
Bacillota
TAG
Leu
>WENV170785475
MDSP01072664
144762
Bacillota
TCT
Arg
>WENV170785476
MDSP01072664
235290
Bacillota
TTG
Gln
>WENV170785477
MDSP01072664
235287
Bacillota
TTT
Lys
>WENV170785487
MDSP01078761
173811
Bacillota
GTC
Asp
>WENV170785525
MDSP01102117
144668
Bacillota
GTC
Asp
>WENV170785559
MDSP01126430
283807
Bacillota
TAC
Val
>WENV170785560
MDSP01126430
239832
Bacillota
TGT
Thr
>WENV170785563
MDSP01126430
313454
Bacillota
GAA
Phe
>WENV170785600
MDSP01161938
263765
Bacillota
TAC
Val
>WENV170785647
MDSP01229051
24650
Bacillota
TAA
Leu
>WENV170785654
MDSP01236825
277230
Bacillota
TGT
Thr
>WENV170785659
MDSP01244910
175676
Bacillota
GAT
Ile
>WENV170785661
MDSP01246478
173811
Bacillota
GTC
Asp
>WENV170785663
MDSP01246478
277230
Bacillota
TGT
Thr
>WENV170785692
MDSP01276067
390329
Bacillota
TTC
Glu
>WENV170785717
MDSP01303304
283807
Bacillota
TAC
Val
>WENV170785758
MDSP01350007
150597
Bacillota
TCT
Arg
>WENV170785772
MDSP01367365
175676
Bacillota
GAT
Ile
>WENV170785773
MDSP01367365
283811
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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