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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
21 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003156
NNBT01001966
254595
Alphaproteobacteria
GAA
Phe
>WENV171003164
NNBT01002044
126988
Alphaproteobacteria
GGG
Pro
>WENV171003249
NNBT01002849
268154
Alphaproteobacteria
TGT
Thr
>WENV171003346
NNBT01005663
159305
Alphaproteobacteria
GTC
Asp
>WENV171003331
NNBT01005022
342732
Alphaproteobacteria
CCC
Gly
>WENV171003135
NNBT01001758
251610
Alphaproteobacteria
TGC
Ala
>WENV171003198
NNBT01002345
95946
Alphaproteobacteria
GTA
Tyr
>WENV171003199
NNBT01002345
359774
Alphaproteobacteria
TGT
Thr
>WENV171003159
NNBT01001976
23538
Alphaproteobacteria
CGA
Ser
>WENV171003155
NNBT01001956
146929
Alphaproteobacteria
CCG
Arg
>WENV171003158
NNBT01001971
338268
Alphaproteobacteria
GAC
Val
>WENV171003187
NNBT01002215
350547
Alphaproteobacteria
GCC
Gly
>WENV171003170
NNBT01002083
159476
Alphaproteobacteria
ACG
Arg
>WENV171003153
NNBT01001949
281959
Alphaproteobacteria
CGC
Ala
>WENV171003233
NNBT01002681
24189
Alphaproteobacteria
CGA
Ser
>WENV171003174
NNBT01002094
175860
Alphaproteobacteria
CCT
Arg
>WENV171003193
NNBT01002306
279830
Alphaproteobacteria
TAC
Val
>WENV171003166
NNBT01002068
237571
Alphaproteobacteria
CAT
Met
>WENV171003182
NNBT01002185
146927
Alphaproteobacteria
TGG
Pro
>WENV171003299
NNBT01003775
4717
Alphaproteobacteria
GCT
Ser
>WENV171003191
NNBT01002254
146926
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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