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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV171003198
NNBT01002345
114361
Alphaproteobacteria
GTA
Tyr
>WENV171003256
NNBT01002930
391204
Alphaproteobacteria
TGT
Thr
>WENV171003245
NNBT01002831
88856
Alphaproteobacteria
GTA
Tyr
>WENV171003231
NNBT01002666
68639
Alphaproteobacteria
CAA
Leu
>WENV171003185
NNBT01002195
27939
Alphaproteobacteria
GGA
Ser
>WENV171003194
NNBT01002306
114633
Alphaproteobacteria
TAG
Leu
>WENV171003156
NNBT01001966
290879
Alphaproteobacteria
GAA
Phe
>WENV171003181
NNBT01002181
374802
Alphaproteobacteria
TTC
Glu
>WENV171003235
NNBT01002688
160317
Alphaproteobacteria
CCA
Trp
>WENV171003162
NNBT01002028
411790
Alphaproteobacteria
TTG
Gln
>WENV171003258
NNBT01002956
65397
Alphaproteobacteria
TAA
Leu
>WENV171003331
NNBT01005022
377643
Alphaproteobacteria
CCC
Gly
>WENV171003191
NNBT01002254
162180
Alphaproteobacteria
GTG
His
>WENV171003299
NNBT01003775
6111
Alphaproteobacteria
GCT
Ser
>WENV171003196
NNBT01002308
160315
Alphaproteobacteria
TCT
Arg
>WENV171003189
NNBT01002249
259409
Alphaproteobacteria
GAA
Phe
>WENV171003324
NNBT01004783
169065
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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