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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
92 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180290362
OBIU01013816
235146
Actinomycetota
CGT
Thr
>WENV180289702
OBIU01000069
119475
Actinomycetota
TAA
Leu
>WENV180290939
OBIU01175076
235347
Actinomycetota
GGC
Ala
>WENV180289928
OBIU01000502
235153
Actinomycetota
CCT
Arg
>WENV180290899
OBIU01154957
235153
Actinomycetota
CCT
Arg
>WENV180291006
OBIU01194411
144589
Actinomycetota
ACG
Arg
>WENV180289758
OBIU01000116
16400
Actinomycetota
GAG
Leu
>WENV180289638
OBIU01000042
37070
Actinomycetota
CGA
Ser
>WENV180290304
OBIU01009058
201717
Actinomycetota
CTT
Lys
>WENV180289678
OBIU01000054
201717
Actinomycetota
CTT
Lys
>WENV180289841
OBIU01000288
158720
Actinomycetota
ACG
Arg
>WENV180289751
OBIU01000106
305322
Actinomycetota
TGC
Ala
>WENV180291010
OBIU01194587
245301
Actinomycetota
GCC
Gly
>WENV180290970
OBIU01191385
245301
Actinomycetota
GCC
Gly
>WENV180290240
OBIU01005317
245301
Actinomycetota
GCC
Gly
>WENV180289961
OBIU01000716
245301
Actinomycetota
GCC
Gly
>WENV180290428
OBIU01020568
411601
Actinomycetota
CCC
Gly
>WENV180289819
OBIU01000229
144826
Actinomycetota
GGG
Pro
>WENV180289714
OBIU01000080
338239
Actinomycetota
TTC
Glu
>WENV180289639
OBIU01000042
16219
Actinomycetota
GCT
Ser
>WENV180289761
OBIU01000121
235174
Actinomycetota
TGC
Ala
>WENV180289608
OBIU01000029
235101
Actinomycetota
TTT
Lys
>WENV180289945
OBIU01000594
144625
Actinomycetota
GTC
Asp
>WENV180289662
OBIU01000047
144625
Actinomycetota
GTC
Asp
>WENV180290597
OBIU01047250
153948
Actinomycetota
GGG
Pro
>WENV180289744
OBIU01000099
153948
Actinomycetota
GGG
Pro
>WENV180290486
OBIU01026637
44855
Actinomycetota
TGA
Ser
>WENV180290435
OBIU01021737
37212
Actinomycetota
GAG
Leu
>WENV180289607
OBIU01000028
145345
Actinomycetota
TAC
Val
>WENV180290148
OBIU01003466
44862
Actinomycetota
CGA
Ser
>WENV180289539
OBIU01000006
198659
Actinomycetota
TAC
Val
>WENV180289632
OBIU01000040
413665
Actinomycetota
TTG
Gln
>WENV180289759
OBIU01000119
254857
Actinomycetota
CCG
Arg
>WENV180289582
OBIU01000021
16223
Actinomycetota
GAG
Leu
>WENV180289663
OBIU01000047
144593
Actinomycetota
TAT
Ile
>WENV180289677
OBIU01000054
113703
Actinomycetota
TAG
Leu
>WENV180290219
OBIU01004973
144636
Actinomycetota
GAT
Ile
>WENV180290217
OBIU01004973
144636
Actinomycetota
GAT
Ile
>WENV180290010
OBIU01001027
144636
Actinomycetota
GAT
Ile
>WENV180290008
OBIU01001027
144636
Actinomycetota
GAT
Ile
>WENV180289611
OBIU01000033
45147
Actinomycetota
CGA
Ser
>WENV180289882
OBIU01000360
295695
Actinomycetota
CTC
Glu
>WENV180289634
OBIU01000042
98279
Actinomycetota
GTA
Tyr
>WENV180289883
OBIU01000360
338148
Actinomycetota
CTG
Gln
>WENV180290550
OBIU01037910
235148
Actinomycetota
GTT
Asn
>WENV180289593
OBIU01000025
235148
Actinomycetota
GTT
Asn
>WENV180289583
OBIU01000021
235148
Actinomycetota
GTT
Asn
>WENV180289813
OBIU01000217
53078
Actinomycetota
GGA
Ser
>WENV180289700
OBIU01000067
237792
Actinomycetota
CCT
Arg
>WENV180289549
OBIU01000009
113702
Actinomycetota
TAA
Leu
>WENV180289572
OBIU01000017
176456
Actinomycetota
TCT
Arg
>WENV180290940
OBIU01175437
144825
Actinomycetota
CAT
Met
>WENV180290386
OBIU01015138
338139
Actinomycetota
GTT
Asn
>WENV180290073
OBIU01001876
338139
Actinomycetota
GTT
Asn
>WENV180290297
OBIU01008676
235348
Actinomycetota
CCT
Arg
>WENV180289817
OBIU01000226
237794
Actinomycetota
CCG
Arg
>WENV180289741
OBIU01000094
411554
Actinomycetota
CCC
Gly
>WENV180289739
OBIU01000093
411554
Actinomycetota
CCC
Gly
>WENV180289993
OBIU01000868
113601
Actinomycetota
TAG
Leu
>WENV180289952
OBIU01000640
144595
Actinomycetota
CAA
Leu
>WENV180289703
OBIU01000069
144595
Actinomycetota
CAA
Leu
>WENV180289857
OBIU01000323
145343
Actinomycetota
GGG
Pro
>WENV180289540
OBIU01000006
235149
Actinomycetota
CCT
Arg
>WENV180289612
OBIU01000033
51286
Actinomycetota
TGA
Ser
>WENV180290368
OBIU01014302
414234
Actinomycetota
CTG
Gln
>WENV180290114
OBIU01002653
414234
Actinomycetota
CTG
Gln
>WENV180290093
OBIU01002334
414234
Actinomycetota
CTG
Gln
>WENV180289786
OBIU01000162
414234
Actinomycetota
CTG
Gln
>WENV180290227
OBIU01005017
153915
Actinomycetota
ACG
Arg
>WENV180289625
OBIU01000037
153915
Actinomycetota
ACG
Arg
>WENV180289624
OBIU01000037
153915
Actinomycetota
ACG
Arg
>WENV180289738
OBIU01000093
91808
Actinomycetota
CAG
Leu
>WENV180289992
OBIU01000868
235121
Actinomycetota
CGT
Thr
>WENV180289676
OBIU01000054
235121
Actinomycetota
CGT
Thr
>WENV180289973
OBIU01000742
144635
Actinomycetota
TGG
Pro
>WENV180289740
OBIU01000094
80622
Actinomycetota
CAG
Leu
>WENV180289636
OBIU01000042
44851
Actinomycetota
TGA
Ser
>WENV180290275
OBIU01007631
158513
Actinomycetota
TGG
Pro
>WENV180289533
OBIU01000004
158513
Actinomycetota
TGG
Pro
>WENV180289699
OBIU01000066
163948
Actinomycetota
CAT
Met
>WENV180290971
OBIU01191385
412834
Actinomycetota
GCA
Cys
>WENV180289762
OBIU01000121
235173
Actinomycetota
GGC
Ala
>WENV180289675
OBIU01000054
235173
Actinomycetota
GGC
Ala
>WENV180289631
OBIU01000040
235173
Actinomycetota
GGC
Ala
>WENV180289592
OBIU01000025
235173
Actinomycetota
GGC
Ala
>WENV180289633
OBIU01000040
243162
Actinomycetota
GTT
Asn
>WENV180290484
OBIU01025604
144660
Actinomycetota
TAC
Val
>WENV180289573
OBIU01000017
278447
Actinomycetota
GTG
His
>WENV180289682
OBIU01000057
267574
Actinomycetota
CAC
Val
>WENV180289674
OBIU01000054
267574
Actinomycetota
CAC
Val
>WENV180289658
OBIU01000045
95593
Actinomycetota
>WENV180290020
OBIU01001115
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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