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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180296364
OBJA01000365
183605
Gammaproteobacteria
CCG
Arg
>WENV180297701
OBJA01064894
147373
Gammaproteobacteria
CAT
Met
>WENV180298317
OBJA01272481
159316
Gammaproteobacteria
GGG
Pro
>WENV180297960
OBJA01124130
190805
Gammaproteobacteria
CCG
Arg
>WENV180297587
OBJA01047985
236013
Gammaproteobacteria
TGC
Ala
>WENV180296846
OBJA01003645
276072
Gammaproteobacteria
>WENV180296116
OBJA01000004
147647
Gammaproteobacteria
CAT
Met
>WENV180297922
OBJA01114040
51143
Gammaproteobacteria
TGA
Ser
>WENV180296841
OBJA01003470
190084
Gammaproteobacteria
CCT
Arg
>WENV180296784
OBJA01002638
190084
Gammaproteobacteria
CCT
Arg
>WENV180296203
OBJA01000056
148148
Gammaproteobacteria
GAC
Val
>WENV180296499
OBJA01000674
241478
Gammaproteobacteria
TGT
Thr
>WENV180297791
OBJA01085193
249963
Gammaproteobacteria
GGT
Thr
>WENV180297640
OBJA01055781
65075
Gammaproteobacteria
CAA
Leu
>WENV180299053
OBJA01922577
270849
Gammaproteobacteria
TTC
Glu
>WENV180296800
OBJA01002962
270849
Gammaproteobacteria
TTC
Glu
>WENV180297517
OBJA01038543
185755
Gammaproteobacteria
GAT
Ile
>WENV180297234
OBJA01016627
189955
Gammaproteobacteria
GAT
Ile
>WENV180297277
OBJA01019334
419491
Gammaproteobacteria
CTG
Gln
>WENV180298030
OBJA01143706
266908
Gammaproteobacteria
CGC
Ala
>WENV180297081
OBJA01009524
162437
Gammaproteobacteria
TCT
Arg
>WENV180297342
OBJA01023616
103042
Gammaproteobacteria
TAG
Leu
>WENV180299042
OBJA01911431
249882
Gammaproteobacteria
GTT
Asn
>WENV180297796
OBJA01086594
278793
Gammaproteobacteria
GTG
His
>WENV180297080
OBJA01009524
186449
Gammaproteobacteria
TGG
Pro
>WENV180298613
OBJA01472331
59460
Gammaproteobacteria
CAA
Leu
>WENV180298475
OBJA01365500
95944
Gammaproteobacteria
GAG
Leu
>WENV180298528
OBJA01397329
248781
Gammaproteobacteria
TTG
Gln
>WENV180297711
OBJA01067475
353410
Gammaproteobacteria
CTG
Gln
>WENV180297867
OBJA01102912
243921
Gammaproteobacteria
TTT
Lys
>WENV180296149
OBJA01000018
243921
Gammaproteobacteria
TTT
Lys
>WENV180297228
OBJA01016281
17108
Gammaproteobacteria
GCT
Ser
>WENV180297210
OBJA01014900
264150
Gammaproteobacteria
TGT
Thr
>WENV180297089
OBJA01009707
237421
Gammaproteobacteria
TGT
Thr
>WENV180296977
OBJA01006764
257778
Gammaproteobacteria
TAC
Val
>WENV180296994
OBJA01007128
251608
Gammaproteobacteria
GAA
Phe
>WENV180298494
OBJA01376773
411735
Gammaproteobacteria
GCA
Cys
>WENV180296434
OBJA01000524
411735
Gammaproteobacteria
GCA
Cys
>WENV180297067
OBJA01009177
101786
Gammaproteobacteria
GAG
Leu
>WENV180296468
OBJA01000611
147033
Gammaproteobacteria
CCT
Arg
>WENV180298900
OBJA01760057
59485
Gammaproteobacteria
CAG
Leu
>WENV180298073
OBJA01161941
190809
Gammaproteobacteria
GGG
Pro
>WENV180298852
OBJA01700856
96065
Gammaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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