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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
95 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180442905
OBWY01000422
24650
Bacillota
TAA
Leu
>WENV180443179
OBWY01002312
24650
Bacillota
TAA
Leu
>WENV180443242
OBWY01002942
24650
Bacillota
TAA
Leu
>WENV180443463
OBWY01008701
24650
Bacillota
TAA
Leu
>WENV180443621
OBWY01024324
361659
Bacillota
GCC
Gly
>WENV180443721
OBWY01048167
283807
Bacillota
TAC
Val
>WENV180443688
OBWY01039959
37213
Bacillota
TGA
Ser
>WENV180442839
OBWY01000258
267649
Bacillota
TAC
Val
>WENV180442841
OBWY01000258
267649
Bacillota
TAC
Val
>WENV180443187
OBWY01002415
267649
Bacillota
TAC
Val
>WENV180443575
OBWY01016771
267649
Bacillota
TAC
Val
>WENV180442918
OBWY01000485
339890
Bacillota
TTG
Gln
>WENV180442792
OBWY01000140
338152
Bacillota
TTC
Glu
>WENV180443062
OBWY01001191
23769
Bacillota
TAA
Leu
>WENV180443365
OBWY01005899
148239
Bacillota
TCT
Arg
>WENV180443667
OBWY01032652
235154
Bacillota
GTT
Asn
>WENV180443627
OBWY01024881
235154
Bacillota
GTT
Asn
>WENV180443333
OBWY01005052
235154
Bacillota
GTT
Asn
>WENV180443164
OBWY01002181
235154
Bacillota
GTT
Asn
>WENV180443803
OBWY01082750
97943
Bacillota
GTA
Tyr
>WENV180443154
OBWY01002099
338147
Bacillota
CTC
Glu
>WENV180442955
OBWY01000589
338147
Bacillota
CTC
Glu
>WENV180442954
OBWY01000589
338147
Bacillota
CTC
Glu
>WENV180443610
OBWY01022554
235150
Bacillota
TGC
Ala
>WENV180443620
OBWY01024324
114359
Bacillota
TAG
Leu
>WENV180443639
OBWY01026503
235137
Bacillota
TGC
Ala
>WENV180443583
OBWY01017266
235137
Bacillota
TGC
Ala
>WENV180442670
OBWY01000006
340802
Bacillota
TTG
Gln
>WENV180443253
OBWY01003084
338143
Bacillota
CTC
Glu
>WENV180443252
OBWY01003084
338143
Bacillota
CTC
Glu
>WENV180443574
OBWY01016771
144668
Bacillota
GTC
Asp
>WENV180443461
OBWY01008701
144668
Bacillota
GTC
Asp
>WENV180443538
OBWY01012920
429429
Bacillota
CCA
Trp
>WENV180442987
OBWY01000723
429429
Bacillota
CCA
Trp
>WENV180442952
OBWY01000582
429429
Bacillota
CCA
Trp
>WENV180442867
OBWY01000315
429429
Bacillota
CCA
Trp
>WENV180443394
OBWY01006791
41154
Bacillota
TAA
Leu
>WENV180442705
OBWY01000028
44859
Bacillota
AAG
Leu
>WENV180443678
OBWY01036164
186380
Bacillota
GTC
Asp
>WENV180443362
OBWY01005693
156937
Bacillota
GTG
His
>WENV180443778
OBWY01069149
338550
Bacillota
>WENV180443631
OBWY01024881
149041
Bacillota
GTC
Asp
>WENV180443717
OBWY01048036
380750
Bacillota
TGT
Thr
>WENV180443173
OBWY01002265
37269
Bacillota
TGA
Ser
>WENV180442833
OBWY01000239
37269
Bacillota
TGA
Ser
>WENV180443127
OBWY01001723
155089
Bacillota
CAT
Met
>WENV180442791
OBWY01000140
287000
Bacillota
GTT
Asn
>WENV180442783
OBWY01000126
169968
Bacillota
CAT
Met
>WENV180442723
OBWY01000046
162445
Bacillota
CAT
Met
>WENV180442721
OBWY01000046
162445
Bacillota
CAT
Met
>WENV180442690
OBWY01000019
152492
Bacillota
GGG
Pro
>WENV180443747
OBWY01052349
411585
Bacillota
GCA
Cys
>WENV180443544
OBWY01013273
144599
Bacillota
GTC
Asp
>WENV180443322
OBWY01004660
100326
Bacillota
GTA
Tyr
>WENV180442903
OBWY01000400
100326
Bacillota
GTA
Tyr
>WENV180442898
OBWY01000384
100326
Bacillota
GTA
Tyr
>WENV180443366
OBWY01005899
144610
Bacillota
GTG
His
>WENV180442669
OBWY01000006
144610
Bacillota
GTG
His
>WENV180443677
OBWY01036164
263765
Bacillota
TAC
Val
>WENV180443716
OBWY01048036
193665
Bacillota
GTC
Asp
>WENV180443174
OBWY01002265
10680
Bacillota
GGA
Ser
>WENV180443552
OBWY01013678
412387
Bacillota
GCA
Cys
>WENV180442931
OBWY01000513
18852
Bacillota
GCT
Ser
>WENV180443493
OBWY01010031
344183
Bacillota
CTG
Gln
>WENV180443800
OBWY01082585
239832
Bacillota
TGT
Thr
>WENV180443176
OBWY01002282
185292
Bacillota
ACG
Arg
>WENV180443085
OBWY01001373
59296
Bacillota
AAG
Leu
>WENV180443580
OBWY01016771
235127
Bacillota
TTT
Lys
>WENV180443217
OBWY01002645
235127
Bacillota
TTT
Lys
>WENV180443214
OBWY01002645
147674
Bacillota
TCT
Arg
>WENV180443629
OBWY01024881
241432
Bacillota
TGT
Thr
>WENV180443622
OBWY01024324
411739
Bacillota
TCC
Gly
>WENV180443751
OBWY01053049
235638
Bacillota
GAA
Phe
>WENV180443771
OBWY01063957
163753
Bacillota
TGG
Pro
>WENV180443619
OBWY01024324
237963
Bacillota
TTT
Lys
>WENV180443623
OBWY01024324
201667
Bacillota
TCT
Arg
>WENV180443617
OBWY01024324
279635
Bacillota
GTG
His
>WENV180443232
OBWY01002798
144652
Bacillota
GTC
Asp
>WENV180442895
OBWY01000384
144652
Bacillota
GTC
Asp
>WENV180443718
OBWY01048036
102996
Bacillota
GTA
Tyr
>WENV180443748
OBWY01052349
144833
Bacillota
ACG
Arg
>WENV180443676
OBWY01036164
353527
Bacillota
TTC
Glu
>WENV180443508
OBWY01010696
144762
Bacillota
TCT
Arg
>WENV180443725
OBWY01048624
198135
Bacillota
GAT
Ile
>WENV180443779
OBWY01070777
157635
Bacillota
TCT
Arg
>WENV180442668
OBWY01000006
157635
Bacillota
TCT
Arg
>WENV180443650
OBWY01028343
299139
Bacillota
TGC
Ala
>WENV180443439
OBWY01008334
414486
Bacillota
CCC
Gly
>WENV180443499
OBWY01010151
272488
Bacillota
GAA
Phe
>WENV180443103
OBWY01001502
272488
Bacillota
GAA
Phe
>WENV180443065
OBWY01001213
272488
Bacillota
GAA
Phe
>WENV180443515
OBWY01010906
114075
Bacillota
TAG
Leu
>WENV180443250
OBWY01003056
119513
Bacillota
CAA
Leu
>WENV180443444
OBWY01008510
273862
Bacillota
TGC
Ala
>WENV180443521
OBWY01011079
338131
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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