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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180783147
ODIQ01002200
243647
Bacillota
TTT
Lys
>WENV180783339
ODIQ01004999
243647
Bacillota
TTT
Lys
>WENV180783838
ODIQ01034275
339630
Bacillota
GCC
Gly
>WENV180783848
ODIQ01034794
16842
Bacillota
CGA
Ser
>WENV180783754
ODIQ01024478
37213
Bacillota
TGA
Ser
>WENV180783737
ODIQ01022232
235693
Bacillota
GGT
Thr
>WENV180783764
ODIQ01025658
246392
Bacillota
GTT
Asn
>WENV180784058
ODIQ01105560
155040
Bacillota
GAT
Ile
>WENV180784100
ODIQ01138273
338152
Bacillota
TTC
Glu
>WENV180783826
ODIQ01032219
411591
Bacillota
GGT
Thr
>WENV180783701
ODIQ01019458
243119
Bacillota
CTT
Lys
>WENV180783086
ODIQ01001356
243119
Bacillota
CTT
Lys
>WENV180784000
ODIQ01074546
235150
Bacillota
TGC
Ala
>WENV180783355
ODIQ01005324
235150
Bacillota
TGC
Ala
>WENV180783400
ODIQ01006049
413601
Bacillota
GCA
Cys
>WENV180783999
ODIQ01074208
235137
Bacillota
TGC
Ala
>WENV180783772
ODIQ01026337
235137
Bacillota
TGC
Ala
>WENV180784120
ODIQ01154911
16834
Bacillota
GCT
Ser
>WENV180784132
ODIQ01174189
243646
Bacillota
GTT
Asn
>WENV180783146
ODIQ01002200
243646
Bacillota
GTT
Asn
>WENV180783497
ODIQ01008447
114002
Bacillota
CAA
Leu
>WENV180783174
ODIQ01002340
114002
Bacillota
CAA
Leu
>WENV180783921
ODIQ01049743
342736
Bacillota
TTG
Gln
>WENV180783877
ODIQ01039580
37437
Bacillota
TAA
Leu
>WENV180783833
ODIQ01032912
340265
Bacillota
GCC
Gly
>WENV180783890
ODIQ01041835
144763
Bacillota
TGG
Pro
>WENV180783380
ODIQ01005422
113951
Bacillota
GTA
Tyr
>WENV180782840
ODIQ01000251
113951
Bacillota
GTA
Tyr
>WENV180783149
ODIQ01002200
243612
Bacillota
TAC
Val
>WENV180784019
ODIQ01082749
37551
Bacillota
CGA
Ser
>WENV180783087
ODIQ01001356
411585
Bacillota
GCA
Cys
>WENV180783837
ODIQ01034190
147135
Bacillota
ACG
Arg
>WENV180783393
ODIQ01005893
242848
Bacillota
GAA
Phe
>WENV180783378
ODIQ01005422
242848
Bacillota
GAA
Phe
>WENV180783314
ODIQ01004556
342895
Bacillota
CAT
Met
>WENV180783313
ODIQ01004497
342895
Bacillota
CAT
Met
>WENV180782591
ODIQ01000060
10680
Bacillota
GGA
Ser
>WENV180783262
ODIQ01003399
411584
Bacillota
TCC
Gly
>WENV180783910
ODIQ01046713
236044
Bacillota
CAT
Met
>WENV180783911
ODIQ01046713
341777
Bacillota
TTC
Glu
>WENV180783479
ODIQ01007859
341777
Bacillota
TTC
Glu
>WENV180784062
ODIQ01107632
241471
Bacillota
TGC
Ala
>WENV180783744
ODIQ01023105
241471
Bacillota
TGC
Ala
>WENV180783373
ODIQ01005422
148057
Bacillota
CAT
Met
>WENV180782922
ODIQ01000452
145057
Bacillota
TGG
Pro
>WENV180783952
ODIQ01058798
144962
Bacillota
CAT
Met
>WENV180784070
ODIQ01114393
152046
Bacillota
TCT
Arg
>WENV180783721
ODIQ01020816
237846
Bacillota
GCC
Gly
>WENV180783964
ODIQ01060778
235197
Bacillota
GTC
Asp
>WENV180783873
ODIQ01039580
235197
Bacillota
GTC
Asp
>WENV180783407
ODIQ01006089
235197
Bacillota
GTC
Asp
>WENV180783669
ODIQ01016816
342061
Bacillota
GCA
Cys
>WENV180784050
ODIQ01101493
152051
Bacillota
ACG
Arg
>WENV180783912
ODIQ01046713
235288
Bacillota
TAC
Val
>WENV180783480
ODIQ01007859
235288
Bacillota
TAC
Val
>WENV180783263
ODIQ01003399
235288
Bacillota
TAC
Val
>WENV180784098
ODIQ01137978
235807
Bacillota
CAT
Met
>WENV180783124
ODIQ01001889
342936
Bacillota
CCT
Arg
>WENV180783389
ODIQ01005893
147183
Bacillota
GTT
Asn
>WENV180783341
ODIQ01005042
147183
Bacillota
GTT
Asn
>WENV180782837
ODIQ01000251
147183
Bacillota
GTT
Asn
>WENV180783337
ODIQ01004999
243613
Bacillota
GTG
His
>WENV180782668
ODIQ01000102
144672
Bacillota
TCT
Arg
>WENV180783953
ODIQ01058798
235292
Bacillota
CCA
Trp
>WENV180783738
ODIQ01022232
152491
Bacillota
CAT
Met
>WENV180784094
ODIQ01134454
144762
Bacillota
TCT
Arg
>WENV180783729
ODIQ01021961
237681
Bacillota
GTC
Asp
>WENV180783331
ODIQ01004884
413657
Bacillota
CCC
Gly
>WENV180783143
ODIQ01002170
238945
Bacillota
GCC
Gly
>WENV180782494
ODIQ01000027
238945
Bacillota
GCC
Gly
>WENV180783792
ODIQ01027423
238857
Bacillota
CCA
Trp
>WENV180783338
ODIQ01004999
343027
Bacillota
TTG
Gln
>WENV180783034
ODIQ01001054
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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